RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 C9P02748 559 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 TFPTP0C1Z6 253 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 C8orf89P0DMQ9 161 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 GLB1P16278 677 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 GPR3P46089 330 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 SELENOWP63302 87 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 CSTF1Q05048 431 aaKnown RBP11.96□□□□□ -0.5
USP3-213ENST00000559711 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.5
USP3-213ENST00000559711 NR1D2Q14995 579 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 IQCCQ4KMZ1 466 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 C6orf52Q5T4I8 152 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 REEP3Q6NUK4 255 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 FAM92BQ6ZTR7 304 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 USP53Q70EK8 1073 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 VTCN1Q7Z7D3 282 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 CARFQ8N187 725 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 CSF3RQ99062 836 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 DOHHQ9BU89 302 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 SERHL2Q9H4I8 314 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 ANGPT4Q9Y264 503 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 NAALAD2Q9Y3Q0 740 aa11.96□□□□□ -0.5
USP3-213ENST00000559711 GOLGA4Q13439 2230 aaKnown RBP11.96□□□□□ -0.5
USP3-213ENST00000559711 MDC1Q14676 2089 aaKnown RBP11.96□□□□□ -0.5
USP3-213ENST00000559711 EML5Q05BV3 1969 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 IGHV1OR21-1A0A087WYE8 117 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 IGHV5-51A0A0C4DH38 117 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 A0A1W2PS29 197 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 M0QX08 132 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 EI24O14681 340 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 DPM1O60762 260 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 IFNA14P01570 189 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 CTSBP07858 339 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 FHP07954 510 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 ZNF23P17027 643 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 AQP1P29972 269 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 ALDH4A1P30038 563 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 XKP51811 444 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 GFERP55789 205 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 RPS26P62854 115 aaKnown RBP11.95□□□□□ -0.5
USP3-213ENST00000559711 KCNJ10P78508 379 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 TP53BP2Q13625 1128 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 PDK3Q15120 406 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 DEFB110Q30KQ9 67 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 TNFAIP8L2Q6P589 184 aaPredicted RBP11.95□□□□□ -0.5
USP3-213ENST00000559711 TBPL2Q6SJ96 375 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 KANSL1Q7Z3B3 1105 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 PATL1Q86TB9 770 aaKnown RBP11.95□□□□□ -0.5
USP3-213ENST00000559711 CA13Q8N1Q1 262 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 SVOPLQ8N434 492 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 METTL25Q8N6Q8 603 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 OR56A1Q8NGH5 318 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 MIPOL1Q8TD10 442 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 SLC38A5Q8WUX1 472 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 NCSTNQ92542 709 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 TAMM41Q96BW9 452 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 ELP4Q96EB1 424 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 C7orf34Q96L11 122 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 TGM7Q96PF1 710 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 STARD5Q9NSY2 213 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 ZCCHC3Q9NUD5 404 aaKnown RBP11.95□□□□□ -0.5
USP3-213ENST00000559711 NTMQ9P121 344 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 PLCL2Q9UPR0 1127 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 ZNF451Q9Y4E5 1061 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 SPACA6W5XKT8 324 aa11.95□□□□□ -0.5
USP3-213ENST00000559711 TDRD6O60522 2096 aaKnown RBP11.95□□□□□ -0.5
USP3-213ENST00000559711 MAGEA13PA6NCF6 341 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 EMC8O43402 210 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 HRO43593 1189 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 FABP3P05413 133 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 CLCN2P51788 898 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 OR1D5P58170 312 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 OLR1P78380 273 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 SIM1P81133 766 aaPredicted RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 TXNL4AP83876 142 aaKnown RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 VLDLRP98155 873 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 MAPK11Q15759 364 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 GPR19Q15760 415 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 NKAIN2Q5VXU1 208 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 PEAR1Q5VY43 1037 aaPredicted RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 NIPAL1Q6NVV3 410 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ZDHHC13Q8IUH4 622 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 LRRC25Q8N386 305 aaPredicted RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 OR9A2Q8NGT5 310 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 TANKQ92844 425 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 SLC35G5Q96KT7 338 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 ANKHQ9HCJ1 492 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ENAMQ9NRM1 1142 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 SEMA5BQ9P283 1151 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 PADI2Q9Y2J8 665 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 A0A1B0GTQ1 180 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 G3V2T6 193 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 PLOD2O00469 737 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 GNGT2O14610 69 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 B4GAT1O43505 415 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms