RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TINAGQ9UJW2 476 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CORO1CQ9ULV4 474 aaPredicted RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 PYCARDQ9ULZ3 195 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SLC22A7Q9Y694 548 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SAR1BQ9Y6B6 198 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 TEX264Q9Y6I9 313 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 KCNE2Q9Y6J6 123 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 A0A1W2PQ72 361 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 C7orf72A4D263 438 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 WIPF3A6NGB9 483 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 C4orf51C9J302 202 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 PHGDHO43175 533 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 S100BP04271 92 aaPredicted RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 STSP08842 583 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 ENO2P09104 434 aaPredicted RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 RNH1P13489 461 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 SSTR1P30872 391 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 RFC3P40938 356 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 RPL21P46778 160 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 TDGF1P3P51864 188 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 PLA2G16P53816 162 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 HSF1Q00613 529 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 RBPJQ06330 500 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 C2orf54Q08AI8 447 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 INAQ16352 499 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 STEAP4Q687X5 459 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 RPUSD3Q6P087 351 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 C3P1Q6ZMU1 363 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 Q6ZPA2 131 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 NCCRP1Q6ZVX7 275 aaPredicted RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 GALNTL5Q7Z4T8 443 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 CTAGE3PQ8IX95 158 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.85□□□□□ -1.31
SPG11-213ENST00000558988 NKAPQ8N5F7 415 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 ANKRD53Q8N9V6 530 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 FAM47BQ8NA70 645 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 NUDT10Q8NFP7 164 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 M1APQ8TC57 530 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 NT5CQ8TCD5 201 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 UTP15Q8TED0 518 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 PYROXD1Q8WU10 500 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 ESAMQ96AP7 390 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 LRRC39Q96DD0 335 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 NUDT11Q96G61 164 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 VPS39Q96JC1 886 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 FAR2Q96K12 515 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 RUNDC3BQ96NL0 473 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 OR1F2PQ96R84 312 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 NPAS2Q99743 824 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 FAM129AQ9BZQ8 928 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 MMP25Q9NPA2 562 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 LRFN1Q9P244 771 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 FBXW2Q9UKT8 454 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 PCDHB10Q9UN67 800 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 MTO1Q9Y2Z2 717 aaKnown RBP6.85□□□□□ -1.31
SPG11-213ENST00000558988 POLEQ07864 2286 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 NOTCH2Q04721 2471 aa6.85□□□□□ -1.31
SPG11-213ENST00000558988 TRBV11-1A0A0K0K1C0 115 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 URADA6NGE7 173 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 CXorf49A8MYA2 514 aaPredicted RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 CCDC188H7C350 402 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 ERI3O43414 337 aaKnown RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 NPHS1O60500 1241 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 CDC40O60508 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
SPG11-213ENST00000558988 CCNT2O60583 730 aaKnown RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 SLC19A2O60779 497 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 H2AFYO75367 372 aaKnown RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 SLC25A12O75746 678 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 MYO1DO94832 1006 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 IFNA16P05015 189 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 CCDC166P0CW27 439 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 C1GALT1C1LP0DN25 315 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 ABOP16442 354 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 IL10P22301 178 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 PPP2R1BP30154 601 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 AHRP35869 848 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 HSPA7P48741 367 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 GPR85P60893 370 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 CALCOCO2Q13137 446 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 SLC13A2Q13183 592 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 SLMAPQ14BN4 828 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 C3AR1Q16581 482 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 PPP1R3AQ16821 1122 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 ZNF324BQ6AW86 544 aaPredicted RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 SP5Q6BEB4 398 aaPredicted RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 ADNP2Q6IQ32 1131 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 GALNT7Q86SF2 657 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 ADAMTSL2Q86TH1 951 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 RPS19BP1Q86WX3 136 aaKnown RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 CA13Q8N1Q1 262 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 C17orf53Q8N3J3 647 aaPredicted RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 AFAP1L2Q8N4X5 818 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 TMEM178AQ8NBL3 297 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 FAM98AQ8NCA5 519 aaKnown RBP6.84□□□□□ -1.31
SPG11-213ENST00000558988 MDS2Q8NDY4 140 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 PLPP5Q8NEB5 264 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 TRPV3Q8NET8 790 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 OR4K1Q8NGD4 311 aa6.84□□□□□ -1.31
SPG11-213ENST00000558988 PDLIM2Q96JY6 352 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms