RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ZNF350Q9GZX5 532 aa2.68□□□□□ -1.98
VPS13C-207ENST00000558919 ELL3Q9HB65 397 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-207ENST00000558919 ABCB10Q9NRK6 738 aa2.68□□□□□ -1.98
VPS13C-207ENST00000558919 ABCC13Q9NSE7 274 aa2.68□□□□□ -1.98
VPS13C-207ENST00000558919 DNAJC17Q9NVM6 304 aaKnown RBP2.68□□□□□ -1.98
VPS13C-207ENST00000558919 ZNF446Q9NWS9 450 aa2.68□□□□□ -1.98
VPS13C-207ENST00000558919 ITM2BQ9Y287 266 aa2.68□□□□□ -1.98
VPS13C-207ENST00000558919 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-207ENST00000558919 PSMA7O14818 248 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 NME6O75414 186 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-207ENST00000558919 RHBDL1O75783 438 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 EPOP01588 193 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 HSD17B1P14061 328 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 GPX3P22352 226 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 IST1P53990 364 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 LCP2Q13094 533 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 CGB2Q6NT52 195 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 GBP6Q6ZN66 633 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 ASPGQ86U10 573 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 OR8H3Q8N146 312 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 SLC22A18ASQ8N1D0 253 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 PARP8Q8N3A8 854 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 ARL14Q8N4G2 192 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 TRPV3Q8NET8 790 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 TBCKQ8TEA7 893 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 BADQ92934 168 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 PNPLA2Q96AD5 504 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 UTP14AQ9BVJ6 771 aaKnown RBP2.67□□□□□ -1.98
VPS13C-207ENST00000558919 ACPTQ9BZG2 426 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 WWP1Q9H0M0 922 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 RSPH14Q9UHP6 348 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 TEKT2Q9UIF3 430 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 PSORS1C1Q9UIG5 152 aa2.67□□□□□ -1.98
VPS13C-207ENST00000558919 C13orf42A0A1B0GVH6 325 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 SLC33A1O00400 549 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CRCPO75575 148 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 ANXA9O76027 345 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CPNE6O95741 557 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 IGHG3P01860 377 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 MMP10P09238 476 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 TNFRSF4P43489 277 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 MTIF2P46199 727 aaKnown RBP2.66□□□□□ -1.98
VPS13C-207ENST00000558919 HSPA14Q0VDF9 509 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 SCARB2Q14108 478 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CNPY1Q3B7I2 92 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 KBTBD12Q3ZCT8 623 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 C14orf28Q4W4Y0 310 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CCDC158Q5M9N0 1113 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 NAXDQ8IW45 347 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 LAX1Q8IWV1 398 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CLYBLQ8N0X4 340 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CHDHQ8NE62 594 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-207ENST00000558919 OR4F5Q8NH21 305 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 GTSF1Q8WW33 167 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 PANX3Q96QZ0 392 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 SPAG8Q99932 426 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-207ENST00000558919 AGPAT1Q99943 283 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 TTYH2Q9BSA4 534 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 FAM212BQ9NTI7 297 aaPredicted RBP2.66□□□□□ -1.98
VPS13C-207ENST00000558919 Q9UF83 564 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 MLXQ9UH92 298 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 CIDEBQ9UHD4 219 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 RNF24Q9Y225 148 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 KCNK6Q9Y257 313 aa2.66□□□□□ -1.98
VPS13C-207ENST00000558919 HSP90AB1P08238 724 aaKnown RBP2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CT45A8P0DMV1 189 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CT45A9P0DMV2 189 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 P4HA1P13674 534 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 FASP25445 335 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CALML3P27482 149 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CHRNA3P32297 505 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 TCF7P36402 384 aaPredicted RBP2.65□□□□□ -1.99
VPS13C-207ENST00000558919 FNTAP49354 379 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 MEOX2P50222 304 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 SLC12A3P55017 1021 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 P2RY14Q15391 338 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 TYSND1Q2T9J0 566 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 WSCD2Q2TBF2 565 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CT45A2Q5DJT8 189 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 DCAF12Q5T6F0 453 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 C11orf88Q6PI97 169 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CD164L2Q6UWJ8 174 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 Q6ZRG5 221 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 LINC00696Q6ZRV3 163 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 OTOAQ7RTW8 1153 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 ITIH5Q86UX2 942 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 VASH2Q86V25 355 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 WDR49Q8IV35 697 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 NUP93Q8N1F7 819 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 AP2M1Q96CW1 435 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 SIGLEC12Q96PQ1 595 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 ADPGKQ9BRR6 497 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 NAPBQ9H115 298 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 CXXC4Q9H2H0 198 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 GDF3Q9NR23 364 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 NYAP2Q9P242 653 aa2.65□□□□□ -1.99
VPS13C-207ENST00000558919 EIF3KQ9UBQ5 218 aaKnown RBP2.65□□□□□ -1.99
VPS13C-207ENST00000558919 ATRXP46100 2492 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms