RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 B3GALT1Q9Y5Z6 326 aa13.99□□□□□ -0.17
VPS18-202ENST00000558474 TRBV5-3A0A0A0MS03 114 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 VSTM2BA6NLU5 285 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 FAM227AF5H4B4 570 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 FXYD1O00168 92 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 NVLO15381 856 aaKnown RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 DNAJA2O60884 412 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 DNAJC8O75937 253 aaPredicted RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 CPMP14384 443 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 UQCRC2P22695 453 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 CD82P27701 267 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 PTPN6P29350 595 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 ETV5P41161 510 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 MAGEA8P43361 318 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 NCBP2P52298 156 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS18-202ENST00000558474 PSME3P61289 254 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 HBA1P69905 142 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 MAT1AQ00266 395 aaKnown RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 SLC25A3Q00325 362 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 RUNDC3AQ59EK9 446 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 COX15Q7KZN9 410 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 ZC3H7AQ8IWR0 971 aaKnown RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 CLECL1Q8IZS7 167 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 METTL27Q8N6F8 245 aaPredicted RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 TMEM52Q8NDY8 209 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 PLPP5Q8NEB5 264 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 OR4A15Q8NGL6 344 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 UCN3Q969E3 161 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 ANKRD9Q96BM1 317 aaPredicted RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 MIEF2Q96C03 454 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 ANKRD27Q96NW4 1050 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 SPRY4Q9C004 299 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 GLIPR2Q9H4G4 154 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 RAD21L1Q9H4I0 556 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 SPAG4Q9NPE6 437 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 SEMA3GQ9NS98 782 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 SLC22A11Q9NSA0 550 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 C5AR2Q9P296 337 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 IFT80Q9P2H3 777 aaPredicted RBP13.98□□□□□ -0.17
VPS18-202ENST00000558474 ABCD2Q9UBJ2 740 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 PCDHB14Q9Y5E9 798 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 PCDHGA7Q9Y5G6 932 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 PTPRBP23467 1997 aa13.98□□□□□ -0.17
VPS18-202ENST00000558474 CFAP73A6NFT4 308 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 PLOD2O00469 737 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 PCDH17O14917 1159 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 GSC2O15499 205 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 FGF17O60258 216 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 STK17BO94768 372 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 C6orf47O95873 294 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 DLGAP3O95886 979 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 CCNYL3P0C7X3 344 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SLC6A2P23975 617 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 TXNL4AP83876 142 aaKnown RBP13.97□□□□□ -0.17
VPS18-202ENST00000558474 STX4Q12846 297 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SLC13A2Q13183 592 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SYT16Q17RD7 645 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 RSPO4Q2I0M5 234 aaPredicted RBP13.97□□□□□ -0.17
VPS18-202ENST00000558474 MRPL14Q6P1L8 145 aaKnown RBP13.97□□□□□ -0.17
VPS18-202ENST00000558474 BHLHB9Q6PI77 547 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 ZNF621Q6ZSS3 439 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 ANKRD46Q86W74 232 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 DEFB107AQ8IZN7 70 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 ST13P4Q8IZP2 240 aaPredicted RBP13.97□□□□□ -0.17
VPS18-202ENST00000558474 FBXO27Q8NI29 283 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SUN3Q8TAQ9 357 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SFXN5Q8TD22 340 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 ZNF675Q8TD23 568 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 ZNF578Q96N58 590 aaPredicted RBP13.97□□□□□ -0.17
VPS18-202ENST00000558474 INPP5KQ9BT40 448 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 YIPF2Q9BWQ6 316 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 POLR1BQ9H9Y6 1135 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SLAMF7Q9NQ25 335 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 VAPAQ9P0L0 249 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 NTMQ9P121 344 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 TMEM181Q9P2C4 612 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 FER1L5A0AVI2 2057 aa13.97□□□□□ -0.17
VPS18-202ENST00000558474 ZFHX2Q9C0A1 2572 aaPredicted RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 KIF26BQ2KJY2 2108 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 A0A087WV62 115 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 IGKV3D-11A0A0A0MRZ8 115 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 EVPLLA8MZ36 301 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 C9orf172C9J069 976 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 C9J4A7 227 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 B4GALT2O60909 372 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 LDB3O75112 727 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 KRT75O95678 551 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 RAB40ALP0C0E4 278 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 ZGLP1P0C6A0 271 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 ZNF28P17035 718 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 GPC1P35052 558 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 FEN1P39748 380 aaKnown RBP13.96□□□□□ -0.17
VPS18-202ENST00000558474 CDKN2CP42773 168 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 STT3AP46977 705 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 CLDN6P56747 220 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 PLIN5Q00G26 463 aa13.96□□□□□ -0.17
VPS18-202ENST00000558474 RHAGQ02094 409 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms