RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 NRGNQ92686 78 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 RND1Q92730 232 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 KRT35Q92764 455 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 TMEM125Q96AQ2 219 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 CHP1Q99653 195 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 LPAR4Q99677 370 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 OLFM1Q99784 485 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 OSBPL8Q9BZF1 889 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 UCK2Q9BZX2 261 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 CXXC4Q9H2H0 198 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 TP63Q9H3D4 680 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-211ENST00000558440 MMP25Q9NPA2 562 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 CCM2LQ9NUG4 571 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-211ENST00000558440 PCYOX1Q9UHG3 505 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 RUVBL2Q9Y230 463 aaKnown RBP5.63□□□□□ -1.51
ZEB1-211ENST00000558440 RNF6Q9Y252 685 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 NFS1Q9Y697 457 aa5.63□□□□□ -1.51
ZEB1-211ENST00000558440 NINQ8N4C6 2090 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 FN1P02751 2386 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 A0A1B0GTH9 108 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 GOLGA6L9A6NEM1 432 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 NDC80O14777 642 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 P2RX6O15547 441 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 NEURL1O76050 574 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TOXO94900 526 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TJP3O95049 919 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 NSA2O95478 260 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 METTL18O95568 372 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ENPP1P22413 925 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 DNASE1P24855 282 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ADRA1DP25100 572 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 PTPN7P35236 360 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 MAGEA1P43355 309 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 CYB561P49447 251 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 EFNA3P52797 238 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 GYS2P54840 703 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 HADHBP55084 474 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TFF3Q07654 80 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 FOXD4Q12950 439 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 SEMA3AQ14563 771 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 CEBPEQ15744 281 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 BEAN1Q3B7T3 259 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ANKRD20A4Q4UJ75 823 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 SFT2D3Q587I9 215 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TSTD2Q5T7W7 516 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 HECTD2Q5U5R9 776 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ICE2Q659A1 982 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 C11orf63Q6NUN7 778 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 CAVIN1Q6NZI2 390 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 PAPD4Q6PIY7 484 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 SUSD1Q6UWL2 747 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 PPP1R21Q6ZMI0 780 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ZNF534Q76KX8 674 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TAOK1Q7L7X3 1001 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 LDB1Q86U70 411 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 RPS19BP1Q86WX3 136 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 LRRC6Q86X45 466 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 CHERPQ8IWX8 916 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 MARVELD2Q8N4S9 558 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 FAM71DQ8N9W8 422 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 MYRIPQ8NFW9 859 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 OR52K1Q8NGK4 314 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 OR9A1PQ8NGU1 263 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 OR9A4Q8NGU2 314 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 OR51Q1Q8NH59 317 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 RMND5BQ96G75 393 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 OR2A5Q96R48 311 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 NPAS2Q99743 824 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 EBNA1BP2Q99848 306 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 POLDIP3Q9BY77 421 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TOR3AQ9H497 397 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 SERHL2Q9H4I8 314 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 CDCP1Q9H5V8 836 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 FAM114A2Q9NRY5 505 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ABHD10Q9NUJ1 306 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 ABCF3Q9NUQ8 709 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 HCN3Q9P1Z3 774 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 DKK2Q9UBU2 259 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 SLC2A6Q9UGQ3 507 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 TAC3Q9UHF0 121 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 RIMKLBQ9ULI2 386 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 R3HDM2Q9Y2K5 976 aaKnown RBP5.62□□□□□ -1.51
ZEB1-211ENST00000558440 NBEAL1Q6ZS30 2694 aa5.62□□□□□ -1.51
ZEB1-211ENST00000558440 IGKV1-8A0A0C4DH67 115 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 FAM237BA0A1B0GVD1 139 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 OR2W5A6NFC9 320 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 ERI2A8K979 691 aaKnown RBP5.61□□□□□ -1.51
ZEB1-211ENST00000558440 E7EVH7 732 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 KLRC4-KLRK1H3BQV0 150 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 FCHO1O14526 889 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 HAT1O14929 419 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 CD3EAPO15446 510 aaKnown RBP5.61□□□□□ -1.51
ZEB1-211ENST00000558440 HS6ST1O60243 411 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 KLK8O60259 260 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 NDUFS3O75489 264 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 STATHP02808 62 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 CATP04040 527 aaKnown RBP5.61□□□□□ -1.51
ZEB1-211ENST00000558440 IL1RNP18510 177 aa5.61□□□□□ -1.51
ZEB1-211ENST00000558440 TFEBP19484 476 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms