RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 GALNT8Q9NY28 637 aa16.33■□□□□ 0.2
TSPAN3-204ENST00000558394 ADAM21Q9UKJ8 722 aa16.33■□□□□ 0.2
TSPAN3-204ENST00000558394 GUCA1BQ9UMX6 200 aa16.33■□□□□ 0.2
TSPAN3-204ENST00000558394 SLC6A5Q9Y345 797 aa16.33■□□□□ 0.2
TSPAN3-204ENST00000558394 CHCHD2Q9Y6H1 151 aaPredicted RBP16.33■□□□□ 0.2
TSPAN3-204ENST00000558394 IQANK1A0A1B0GTG1 560 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 TRIM64A6NGJ6 449 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 TRIM64BA6NI03 449 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 CAPN14A8MX76 684 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 TP53I11O14683 189 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 AHSGP02765 367 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 PGAM1P18669 254 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 KCNC1P48547 511 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 ADPRMQ3LIE5 342 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 VASNQ6EMK4 673 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 FRA10AC1Q70Z53 315 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 C9orf40Q8IXQ3 194 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 SRFBP1Q8NEF9 429 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 CAPS2Q9BXY5 557 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 NT5DC2Q9H857 520 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 UBTD1Q9HAC8 227 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 PROK2Q9HC23 129 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 CNOT11Q9UKZ1 510 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 VWA7Q9Y334 891 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 ATRQ13535 2644 aa16.32■□□□□ 0.2
TSPAN3-204ENST00000558394 CHD3Q12873 2000 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 FBXO45P0C2W1 286 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 CYP4B1P13584 511 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 GABRB3P28472 473 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 GCKP35557 465 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 STT3AP46977 705 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 CRYMQ14894 314 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 FAM45BPQ6NSW5 357 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 LYPD8Q6UX82 237 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 PACS2Q86VP3 889 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 TAGAPQ8N103 731 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 FAM45AQ8TCE6 357 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 ABTB1Q969K4 478 aaPredicted RBP16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 PDLIM5Q96HC4 596 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 SIGLEC10Q96LC7 697 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 SFXN3Q9BWM7 321 aa16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 PPANQ9NQ55 473 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-204ENST00000558394 RNF212BA8MTL3 300 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 TRIM3O75382 744 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 SNX4O95219 450 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 HPNP05981 417 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 CPN2P22792 545 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 CDK9P50750 372 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 PGGT1BP53609 377 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 DIO3P55073 304 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 CDKL1Q00532 357 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 PLIN5Q00G26 463 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 BIKQ13323 160 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 NTRK2Q16620 822 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 PPP1R3AQ16821 1122 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 C9orf106Q8NAJ2 232 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 ANKRD9Q96BM1 317 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 NTNG2Q96CW9 530 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 WDYHV1Q96HA8 205 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 ZFP3Q96NJ6 502 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 F2RL3Q96RI0 385 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 KRT12Q99456 494 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 TM9SF2Q99805 663 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 MAPKAP1Q9BPZ7 522 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 UGT2B28Q9BY64 529 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 PRDM7Q9NQW5 492 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 C6orf203Q9P0P8 240 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 CORO1CQ9ULV4 474 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 STAB1Q9NY15 2570 aa16.3■□□□□ 0.2
TSPAN3-204ENST00000558394 DSCAMO60469 2012 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 ANKRD33BA6NCL7 494 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 NPEPPSL1A6NEC2 478 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 CLGNO14967 610 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 TTC4O95801 387 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 IGKV3-11P04433 115 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 GDF5P43026 501 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 MAGEA3P43357 314 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 RPP38P78345 283 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 ACKR1Q16570 336 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 NHSL2Q5HYW2 709 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 RNF111Q6ZNA4 994 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 OR4N5Q8IXE1 308 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 AGGF1Q8N302 714 aaeCLIP16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 ZPLD1Q8TCW7 415 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 PPWD1Q96BP3 646 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 FBXL20Q96IG2 436 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 RILPQ96NA2 401 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 TBCDQ9BTW9 1192 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 PIGMQ9H3S5 423 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 ZNF226Q9NYT6 803 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 GPRC5BQ9NZH0 403 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 OARD1Q9Y530 152 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 IKBKGQ9Y6K9 419 aa16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 FBN1P35555 2871 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-204ENST00000558394 CDC7O00311 574 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 CRLF1O75462 422 aa16.28■□□□□ 0.2
TSPAN3-204ENST00000558394 CNOT4O95628 575 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms