RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MYO18BQ8IUG5 2567 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 CROCCQ5TZA2 2017 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 MED13Q9UHV7 2174 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 ASPDHA6ND91 283 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 CCDC160A6NGH7 325 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 C9J4A7 227 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 UGDHO60701 494 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 CTSVO60911 334 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 WDR47O94967 919 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 WISP1O95388 367 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 TTKP33981 857 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 TAP2Q03519 686 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 LIPEQ05469 1076 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 MERTKQ12866 999 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 E2F2Q14209 437 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 SLC36A3Q495N2 470 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 GGTA1PQ4G0N0 100 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 ATP6AP1LQ52LC2 224 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 MLIPQ5VWP3 458 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 CAPN13Q6MZZ7 669 aaPredicted RBP9.74□□□□□ -0.85
TPM1-212ENST00000558347 THOC6Q86W42 341 aaKnown RBP9.74□□□□□ -0.85
TPM1-212ENST00000558347 SPPL2CQ8IUH8 684 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 RAB42Q8N4Z0 105 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 SNX31Q8N9S9 440 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 L3MBTL4Q8NA19 623 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 OR2L3Q8NG85 312 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 OR52B6Q8NGF0 335 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 PROKR1Q8TCW9 393 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 POP5Q969H6 163 aaKnown RBP9.74□□□□□ -0.85
TPM1-212ENST00000558347 ADI1Q9BV57 179 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 ATG10Q9H0Y0 220 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 ING2Q9H160 280 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 SLC22A11Q9NSA0 550 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 INTS7Q9NVH2 962 aaKnown RBP9.74□□□□□ -0.85
TPM1-212ENST00000558347 ZNF639Q9UID6 485 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 MAGEL2Q9UJ55 1249 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 SRPK3Q9UPE1 567 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 AURKCQ9UQB9 309 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 SLC22A14Q9Y267 594 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 PTGDR2Q9Y5Y4 395 aa9.74□□□□□ -0.85
TPM1-212ENST00000558347 SETXQ7Z333 2677 aaKnown RBP9.74□□□□□ -0.85
TPM1-212ENST00000558347 A0A1B0GTL3 188 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 DLGAP1O14490 977 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 TRMUO75648 421 aaKnown RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 OR4F21O95013 312 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 FKBP9O95302 570 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 LDLRP01130 860 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 PCSK2P16519 638 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 HOXB6P17509 224 aaKnown RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 CASRP41180 1078 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 CASP2P42575 452 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 CCL11P51671 97 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 RPS6KA3P51812 740 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 DIO3P55073 304 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 TBPL1P62380 186 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 ESRRGP62508 458 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 DCDP81605 110 aaKnown RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 ATP1A4Q13733 1029 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 CAPRIN1Q14444 709 aaKnown RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 C6orf136Q5SQH8 315 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 FRMPD2BQ6IN97 320 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 SUSD1Q6UWL2 747 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 TTLL10Q6ZVT0 673 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 ASB18Q6ZVZ8 466 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 MILR1Q7Z6M3 343 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 EPHX4Q8IUS5 362 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 CBR4Q8N4T8 237 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 DTWD1Q8N5C7 304 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 OR4F6Q8NGB9 312 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 LZICQ8WZA0 190 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 SMPDL3AQ92484 453 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 PYCR2Q96C36 320 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 ZNF285Q96NJ3 590 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 OR4K3Q96R72 315 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 NDC1Q9BTX1 674 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 ACAT2Q9BWD1 397 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 SLC29A3Q9BZD2 475 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 SLC6A20Q9NP91 592 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 CCDC177Q9NQR7 707 aaPredicted RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 IFT80Q9P2H3 777 aaPredicted RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 GIMAP2Q9UG22 337 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 PTRH2Q9Y3E5 179 aaKnown RBP9.73□□□□□ -0.85
TPM1-212ENST00000558347 KLK4Q9Y5K2 254 aa9.73□□□□□ -0.85
TPM1-212ENST00000558347 A0A0J9YVX5 310 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 SAC3D1A6NKF1 404 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 H0YAE9 185 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ACOX3O15254 700 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 MED26O95402 600 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CDH1P12830 882 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NPPBP16860 134 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ALAS2P22557 587 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 JAK1P23458 1154 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OTX2P32243 289 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CAPGP40121 348 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 UFM1P61960 85 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 KCNC4Q03721 635 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 KLRB1Q12918 225 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 MAD2L1Q13257 205 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms