RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 FBXO48Q5FWF7 155 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 COLEC12Q5KU26 742 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 LANCL3Q6ZV70 420 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 GPRIN3Q6ZVF9 776 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 TMEM156Q8N614 296 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 ZBTB8BQ8NAP8 495 aaPredicted RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 SELENOMQ8WWX9 145 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 DGAT2Q96PD7 388 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 MTERF1Q99551 399 aaKnown RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 C1QTNF3Q9BXJ4 246 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 LRMDAQ9H2I8 198 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 KLHL31Q9H511 634 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 RPF2Q9H7B2 306 aaKnown RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 SEMA4BQ9NPR2 832 aaPredicted RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 PNO1Q9NRX1 252 aaKnown RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 GIMAP4Q9NUV9 329 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 OLAHQ9NV23 265 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 TUBA8Q9NY65 449 aaPredicted RBP8.12□□□□□ -1.11
USP3-208ENST00000558285 SENP1Q9P0U3 644 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 TBK1Q9UHD2 729 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 PCTPQ9UKL6 214 aa8.12□□□□□ -1.11
USP3-208ENST00000558285 ZNF462Q96JM2 2506 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 PIEZO2Q9H5I5 2752 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 A8MT66 165 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 CAPN14A8MX76 684 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 K7EM74 188 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 ICMTO60725 284 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 ULK1O75385 1050 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 MYO1DO94832 1006 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 UNC5CO95185 931 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 NR2F6P10588 404 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 ITGAMP11215 1152 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 EDN3P14138 238 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 IMPDH1P20839 514 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 GSTT1P30711 240 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 VHLP40337 213 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 TNFSF10P50591 281 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 RPS13P62277 151 aaKnown RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 CLCQ05315 142 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 LCP2Q13094 533 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 LSAMPQ13449 338 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 H3F3CQ6NXT2 135 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 HSDL2Q6YN16 418 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 TMEM151BQ8IW70 566 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 DND1Q8IYX4 353 aaKnown RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 CISD2Q8N5K1 135 aaKnown RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 FAM47BQ8NA70 645 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 POGLUT1Q8NBL1 392 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 TRPC4APQ8TEL6 797 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 TSLPQ969D9 159 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 ZNF382Q96SR6 550 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 ALOXE3Q9BYJ1 711 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 OR51B5Q9H339 312 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 SYNPO2LQ9H987 977 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 PRDM7Q9NQW5 492 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 INTS9Q9NV88 658 aaKnown RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 TBCCD1Q9NVR7 557 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 FBXW2Q9UKT8 454 aa8.11□□□□□ -1.11
USP3-208ENST00000558285 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
USP3-208ENST00000558285 MDC1Q14676 2089 aaKnown RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 IGKV3D-11A0A0A0MRZ8 115 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 IGHV3-20A0A0C4DH32 117 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 A0A0G2JN53 185 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 KLRC4-KLRK1H3BQV0 150 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 AGFG2O95081 481 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 SIX3O95343 332 aaPredicted RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 DDAH2O95865 285 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 WDPCPO95876 746 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 MAOAP21397 527 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 PIK3R1P27986 724 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 CRHR1P34998 444 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 MAPK12P53778 367 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 PRKAA2P54646 552 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 FOXL2P58012 376 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 RPP38P78345 283 aaKnown RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 CSTF3Q12996 717 aaKnown RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 ADRM1Q16186 407 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 SPIN4Q56A73 249 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 ZNF766Q5HY98 468 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 CCNYL2Q5T2Q4 361 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 MTFR2Q6P444 385 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 SCUBE1Q8IWY4 988 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 PLD6Q8N2A8 252 aaKnown RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 OR8K3Q8NH51 312 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 METTL6Q8TCB7 284 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 SLC22A8Q8TCC7 542 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 TRMOQ9BU70 441 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 TXLNGYQ9BZA5 131 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 DDX31Q9H8H2 851 aaKnown RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 EML4Q9HC35 981 aaKnown RBP8.1□□□□□ -1.11
USP3-208ENST00000558285 VTI1BQ9UEU0 232 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 ERVK-11Q9UQG0 969 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 CFL2Q9Y281 166 aa8.1□□□□□ -1.11
USP3-208ENST00000558285 YARS2Q9Y2Z4 477 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms