RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FOLH1Q04609 750 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 C2orf54Q08AI8 447 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 DLG1Q12959 904 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 CUL3Q13618 768 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 SETDB1Q15047 1291 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 PFKFB4Q16877 469 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 EMC4Q5J8M3 183 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 WLSQ5T9L3 541 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 MROH9Q5TGP6 573 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 ZNF585AQ6P3V2 769 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 B3GNT6Q6ZMB0 384 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 TRILQ7L0X0 811 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 CLYBLQ8N0X4 340 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 TMEM251Q8N6I4 163 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 OR5M9Q8NGP3 310 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 RIT1Q92963 219 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 PPWD1Q96BP3 646 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 TREX2Q9BQ50 279 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 DMRT3Q9NQL9 472 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 PNPLA3Q9NST1 481 aa12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-204ENST00000558020 OR6C76A6NM76 312 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 PLPP1O14494 284 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 KLHL2O95198 593 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 IGKV3-11P04433 115 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 C2P06681 752 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 FAM58BPP0C7Q3 252 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 MTHFD2P13995 350 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 GABRA1P14867 456 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 TYK2P29597 1187 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 ETF1P62495 437 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 KCNJ2P63252 427 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 TNFRSF17Q02223 184 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 CPSF6Q16630 551 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 ZNF791Q3KP31 576 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 CES4AQ5XG92 561 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 CCDC71Q8IV32 467 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 TAGAPQ8N103 731 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 MARVELD2Q8N4S9 558 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 ATP6V1E2Q96A05 226 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 CNPPD1Q9BV87 410 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 TSPYL1Q9H0U9 437 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 DDX31Q9H8H2 851 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 IPPKQ9H8X2 491 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 AHSPQ9NZD4 102 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 B4GALT7Q9UBV7 327 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 ATG4BQ9Y4P1 393 aa12.57□□□□□ -0.4
SNRPA1-204ENST00000558020 POLQO75417 2590 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TEP1Q99973 2627 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A096LPK6 155 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TRGV5A0A0B4J1U4 118 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A0G2JMM0 328 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A1W2PPB8 328 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A1W2PRS3 328 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 FAM90A27PA6NNH2 459 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 KIR3DP1A8MWS1 328 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 FOXE1O00358 373 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TP53I11O14683 189 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TOXO94900 526 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 CLDN9O95484 217 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 CCL3P10147 92 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 POU3F2P20265 443 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 GALNSP34059 522 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 ARL1P40616 181 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 ZFP36L2P47974 494 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 DNASE1L1P49184 302 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 NUP107P57740 925 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 RPS13P62277 151 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 FOXO1Q12778 655 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 GTF2H2Q13888 395 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 ZNF267Q14586 743 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 PCBP2Q15366 365 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 UAP1Q16222 522 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 C10orf62Q5T681 223 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 HLA-DQA1Q5Y7H0 255 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 C18orf63Q68DL7 685 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 GTF2H2CQ6P1K8 395 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 CDH24Q86UP0 819 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 CENPLQ8N0S6 344 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 PAQR8Q8TEZ7 354 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 MRRFQ96E11 262 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 SERPINI1Q99574 410 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 ZNF559Q9BR84 538 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TTYH2Q9BSA4 534 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 SORBS1Q9BX66 1292 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 UCK2Q9BZX2 261 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 ZFP64Q9NPA5 681 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 SNX15Q9NRS6 342 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 QPCTLQ9NXS2 382 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 ALKBH4Q9NXW9 302 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TUBA8Q9NY65 449 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 KCNN3Q9UGI6 736 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 TMCO1Q9UM00 188 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
SNRPA1-204ENST00000558020 CSMD2Q7Z408 3487 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms