RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 BBOX1O75936 387 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 NDUFB10O96000 172 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 GOT2P00505 430 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 VTNP04004 478 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 GSTA1P08263 222 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 TPM1P09493 284 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 POLR2MP0CAP2 368 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 STAG3L3P0CL85 134 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 PPIAL4GP0DN37 164 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 MBL2P11226 248 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 HOXB2P14652 356 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 UQCRBP14927 111 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 FOSL2P15408 326 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 MSH3P20585 1137 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 MX1P20591 662 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 EFNA1P20827 205 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 SYKP43405 635 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 ELLP55199 621 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 PROK1P58294 105 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 OSTNP61366 133 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 RELQ04864 619 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 DMTNQ08495 405 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 PJVKQ0ZLH3 352 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 CNTN1Q12860 1018 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 RBM39Q14498 530 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 SQLEQ14534 574 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 TRIP6Q15654 476 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 ACSF3Q4G176 576 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 PDLIM3Q53GG5 364 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 DCAF10Q5QP82 559 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 LCN1P1Q5VSP4 162 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 C1orf189Q5VU69 101 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 IRAK1BP1Q5VVH5 260 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 CARD17Q5XLA6 110 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 ZSCAN25Q6NSZ9 544 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 DPY19L2P2Q6ZN68 376 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 ZNF627Q7L945 461 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 TMCO2Q7Z6W1 182 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 YTHDF3Q7Z739 585 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 CDR2LQ86X02 465 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 PLD3Q8IV08 490 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 ZC3H3Q8IXZ2 948 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 MUC20Q8N307 709 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 PARP8Q8N3A8 854 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 TEX26Q8N6G2 289 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 MAPKAPK5-AS1Q8N8E1 139 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 SYT14Q8NB59 555 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 OR5AU1Q8NGC0 362 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 RAPGEF5Q92565 580 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 SLC25A36Q96CQ1 311 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 COQ8BQ96D53 544 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 SCMH1Q96GD3 660 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 AKR1E2Q96JD6 320 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 TESK2Q96S53 571 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 BCL7BQ9BQE9 202 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 NUP58Q9BVL2 599 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 QTRT1Q9BXR0 403 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 NLNQ9BYT8 704 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 MAGT1Q9H0U3 335 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 STMN4Q9H169 189 aaPredicted RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 EBF3Q9H4W6 596 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 DHX33Q9H6R0 707 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 MED20Q9H944 212 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 UBTD1Q9HAC8 227 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 ELOVL3Q9HB03 270 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 GDF3Q9NR23 364 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 HIF1ANQ9NWT6 349 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 UTP6Q9NYH9 597 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 TECRQ9NZ01 308 aaKnown RBP3.42□□□□□ -1.86
TDP1-217ENST00000557782 C11orf21Q9P2W6 132 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 POLKQ9UBT6 870 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 SUN2Q9UH99 717 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 CDH9Q9ULB4 789 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 LRP12Q9Y561 859 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 INSL5Q9Y5Q6 135 aa3.42□□□□□ -1.86
TDP1-217ENST00000557782 A0A087X1B8 175 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 IGLV5-52A0A0A0MRZ9 124 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 A0A1W2PPI3 338 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 METTL21EPA6NDL7 271 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PROB1E7EW31 1015 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 FPGTO14772 594 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 TNFRSF13BO14836 293 aaPredicted RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 MLNRO43193 412 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ZSCAN12O43309 604 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 OR1F1O43749 312 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 SYNGR3O43761 229 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 SPOPO43791 374 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 FCMRO60667 390 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 TPST2O60704 377 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 KRT33AO76009 404 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 SCGNO76038 276 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 NEBLO76041 1014 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 STK17BO94768 372 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 BAG4O95429 457 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 PMS2P2O95744 297 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 HPRP00739 348 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 S100A9P06702 114 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 GSTT2P0CG29 244 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 GSTT2BP0CG30 244 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms