RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CD47Q08722 323 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 AIMP1Q12904 312 aaKnown RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ABRQ12979 859 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SGCBQ16585 318 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 UNC50Q53HI1 259 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SPOUT1Q5T280 376 aaKnown RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 LYPLAL1Q5VWZ2 237 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 SLC22A10Q63ZE4 541 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 KRT80Q6KB66 452 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 CREBRFQ8IUR6 639 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 LAX1Q8IWV1 398 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF433Q8N7K0 673 aaPredicted RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 LINC01555Q8NAE3 123 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 CHDHQ8NE62 594 aaPredicted RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 OR6J1Q8NGC5 347 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 OR4F5Q8NH21 305 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 OCC1Q8TAD7 63 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 HEXDCQ8WVB3 486 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 MRPS27Q92552 414 aaKnown RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 PNPLA2Q96AD5 504 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 C16orf58Q96GQ5 468 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 RAB40CQ96S21 281 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 WWP1Q9H0M0 922 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 TNMDQ9H2S6 317 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF702PQ9H963 129 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 NTN4Q9HB63 628 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 HPS4Q9NQG7 708 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF331Q9NQX6 463 aaPredicted RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 BCCIPQ9P287 314 aaKnown RBP eCLIP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 APOBEC3BQ9UH17 382 aaKnown RBP1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF175Q9Y473 711 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 ETV7Q9Y603 341 aa1.43□□□□□ -2.18
FOXN3-216ENST00000557496 EEF2KO00418 725 aaKnown RBP1.42□□□□□ -2.18
FOXN3-216ENST00000557496 NUDT21O43809 227 aaKnown RBP1.42□□□□□ -2.18
FOXN3-216ENST00000557496 IGHV3-9P01782 118 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 VDRP11473 427 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 CALML3P27482 149 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 IL2RGP31785 369 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF131P52739 623 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 PTENP60484 403 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 ZNF273Q14593 569 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 COG2Q14746 738 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 PRR4Q16378 134 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 KYNUQ16719 465 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 CCDC14Q49A88 953 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 KRBOX4Q5JUW0 171 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 ACER2Q5QJU3 275 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 ALKBH5Q6P6C2 394 aaKnown RBP1.42□□□□□ -2.18
FOXN3-216ENST00000557496 BRINP3Q76B58 766 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 DNAJB7Q7Z6W7 309 aaPredicted RBP1.42□□□□□ -2.18
FOXN3-216ENST00000557496 GPR65Q8IYL9 337 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 TCP11Q8WWU5 503 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 IL22RA2Q969J5 263 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 RAB3CQ96E17 227 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 NAA11Q9BSU3 229 aaPredicted RBP1.42□□□□□ -2.18
FOXN3-216ENST00000557496 C19orf24Q9BVV8 132 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 ANKRD2Q9GZV1 360 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 ST6GALNAC4Q9H4F1 302 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 EIF3KQ9UBQ5 218 aaKnown RBP1.42□□□□□ -2.18
FOXN3-216ENST00000557496 TMED7Q9Y3B3 224 aa1.42□□□□□ -2.18
FOXN3-216ENST00000557496 GAKO14976 1311 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 PFASO15067 1338 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 IGLV8-61A0A075B6I0 122 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 A0A087WV48 116 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 GTPBP10A4D1E9 387 aaKnown RBP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 ANXA2P2A6NMY6 339 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 FAM86B1E9PN63 330 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 PLOD3O60568 738 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 TBX10O75333 385 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 GGPS1O95749 300 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 MMP10P09238 476 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 FAM86B2P0C5J1 330 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 PSMB1P20618 241 aaKnown RBP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 FUT3P21217 361 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 ZP3P21754 424 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 GLRA1P23415 457 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 RPA1P27694 616 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 GJB2P29033 226 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 TIA1P31483 386 aaKnown RBP eCLIP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 XCR1P46094 333 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 PPP5CP53041 499 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 NAGLUP54802 743 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 TMEM182Q6ZP80 229 aaPredicted RBP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 ENOSF1Q7L5Y1 443 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 OTOAQ7RTW8 1153 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 PHLDB2Q86SQ0 1253 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 ERI1Q8IV48 349 aaKnown RBP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 TIGD4Q8IY51 512 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 CCAR2Q8N163 923 aaKnown RBP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 KCTD6Q8NC69 237 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 ICA1LQ8NDH6 482 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 RIT1Q92963 219 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 MRPL24Q96A35 216 aaKnown RBP1.41□□□□□ -2.18
FOXN3-216ENST00000557496 RMDN1Q96DB5 314 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 FAM129AQ9BZQ8 928 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 TAS2R16Q9NYV7 291 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 RAI14Q9P0K7 980 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 C5AR2Q9P296 337 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 SEC14L4Q9UDX3 406 aa1.41□□□□□ -2.18
FOXN3-216ENST00000557496 TRABD2BA6NFA1 517 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms