RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SLC6A20Q9NP91 592 aa13.48□□□□□ -0.25
TRAPPC6B-206ENST00000556765 LRIT1Q9P2V4 623 aa13.48□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PILRAQ9UKJ1 303 aa13.48□□□□□ -0.25
TRAPPC6B-206ENST00000556765 IGKV1-8A0A0C4DH67 115 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 TCRBV3S1A0A5B6 114 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 OR2A25A4D2G3 310 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 LILRA5A6NI73 299 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 FAM220BPB1ANY3 271 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PLPP1O14494 284 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 EML2O95834 649 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 DRD2P14416 443 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ZNF10P21506 573 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PEBP1P30086 187 aaKnown RBP13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SLC7A1P30825 629 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 MAPK12P53778 367 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 MS4A2Q01362 244 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 HHEXQ03014 270 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 KLC1Q07866 573 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ABHD18Q0P651 414 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 GPR18Q14330 331 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ARMC6Q6NXE6 501 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ERICH5Q6P6B1 374 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 TRIM40Q6P9F5 258 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 LRRC74BQ6ZQY2 392 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SPATA24Q86W54 205 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 NAGSQ8N159 534 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 RNF175Q8N4F7 328 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 NT5CQ8TCD5 201 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SLC37A2Q8TED4 501 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 CREB3L4Q8TEY5 395 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PPCDCQ96CD2 204 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 CCDC74BQ96LY2 380 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 KCNC2Q96PR1 638 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SLC39A3Q9BRY0 314 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 FAIM2Q9BWQ8 316 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SERHLQ9NQF3 203 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 MIEF1Q9NQG6 463 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PRDM9Q9NQV7 894 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ACTR10Q9NZ32 417 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 EHD3Q9NZN3 535 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PCDHGB4Q9UN71 923 aa13.47□□□□□ -0.25
TRAPPC6B-206ENST00000556765 MDC1Q14676 2089 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 MED13LQ71F56 2210 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 IGHV5-10-1A0A0J9YXX1 117 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 A0A0J9YY10 115 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 CASQ2O14958 399 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 HNRNPRO43390 633 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SCN2BO60939 215 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PDGFAP04085 211 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 KLK1P06870 262 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 FURINP09958 794 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SLC35G6P0C7Q6 338 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 FCGR1AP12314 374 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 HOXB9P17482 250 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 TCN1P20061 433 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 DDCP20711 480 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PSMA4P25789 261 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 TPP2P29144 1249 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 BSGP35613 385 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 GRIA3P42263 894 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PTDSS1P48651 473 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 AMZ1Q400G9 498 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 OR4C11Q6IEV9 310 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 OR4F3Q6IEY1 312 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ADNP2Q6IQ32 1131 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SPESP1Q6UW49 350 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SERPINA11Q86U17 422 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 NLGN4XQ8N0W4 816 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 RNF148Q8N7C7 305 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 NLGN4YQ8NFZ3 816 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 OR2L5Q8NG80 312 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 GAL3ST3Q96A11 431 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 POM121Q96HA1 1249 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 EGLN2Q96KS0 407 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PPM1MQ96MI6 270 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 PANX1Q96RD7 426 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 CPPED1Q9BRF8 314 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 NUDT22Q9BRQ3 303 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 THUMPD3Q9BV44 507 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 ARMC1Q9NVT9 282 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 LYARQ9NX58 379 aaKnown RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SLC39A1Q9NY26 324 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SPHK1Q9NYA1 384 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 VAPAQ9P0L0 249 aa13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC6B-206ENST00000556765 SNRNP200O75643 2136 aaKnown RBP13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 FEZF1A0PJY2 475 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 OR5K3A6NET4 321 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 GABRR3A8MPY1 467 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 BTN3A3O00478 584 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 HAT1O14929 419 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 ARPC2O15144 300 aa13.45□□□□□ -0.26
TRAPPC6B-206ENST00000556765 AKAP10O43572 662 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms