RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GJB5O95377 273 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SEC24AO95486 1093 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 STAMBPO95630 424 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 MT-CYBP00156 380 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 KRT8P05787 483 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 BPGMP07738 259 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3HP0C7X1 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ERVK-10P10266 1014 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CDK4P11802 303 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PEPDP12955 493 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CTPS1P17812 591 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 VCLP18206 1134 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ITIH1P19827 911 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CDH3P22223 829 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 GALP22466 123 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 JAK1P23458 1154 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 LMO1P25800 156 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 FOXN2P32314 431 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 MAGEA12P43365 314 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ABCG1P45844 678 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 GSTM5P46439 218 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PGFP49763 221 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CLCN5P51795 746 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CLCNKAP51800 687 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PGDP52209 483 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 UCP2P55851 309 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CRADDP78560 199 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SLC7A9P82251 487 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SATB1Q01826 763 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SLC20A2Q08357 652 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TWF1Q12792 350 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 HNRNPA0Q13151 305 aaKnown RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 STX3Q13277 289 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SCGB2A2Q13296 93 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 RAPSNQ13702 412 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 RUNX2Q13950 521 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 STK11Q15831 433 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 LRRC23Q53EV4 343 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 MPPE1Q53F39 396 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ZNF789Q5FWF6 425 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 FAM91A1Q658Y4 838 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PMS2CLQ68D20 193 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3GQ6DHY5 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CCDC144NLQ6NUI1 221 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 KLC3Q6P597 504 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ZNF66Q6ZN08 573 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 AMZ2Q86W34 360 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CRLF3Q8IUI8 442 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ZNF679Q8IYX0 411 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3Q8IZP1 549 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 CPXM2Q8N436 756 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TSPAN14Q8NG11 270 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 OR13C2Q8NGS9 318 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SPATA22Q8NHS9 363 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 OCC1Q8TAD7 63 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ZNF671Q8TAW3 534 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SUN5Q8TC36 379 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PPP4R1Q8TF05 950 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 GLMPQ8WWB7 406 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 DNASE1L2Q92874 299 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SLAMF9Q96A28 289 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TADA1Q96BN2 335 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CCDC126Q96EE4 140 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TMA16Q96EY4 203 aaKnown RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 RMDN2Q96LZ7 410 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PSKH2Q96QS6 385 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 NUDCD1Q96RS6 583 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 KLF6Q99612 283 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 RAD9AQ99638 391 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 GPR22Q99680 433 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 C19orf43Q9BQ61 176 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 C17orf80Q9BSJ5 609 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 VN1R3Q9BXE9 311 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 NUAK2Q9H093 628 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PLAC1Q9HBJ0 212 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 MLXIPLQ9NP71 852 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 CHRAC1Q9NRG0 131 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 FAM212BQ9NTI7 297 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 TXLNGQ9NUQ3 528 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SMPD3Q9NY59 655 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 HACD3Q9P035 362 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 DLGAP2Q9P1A6 1054 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ABI3Q9P2A4 366 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SLC17A7Q9P2U7 560 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TRMT6Q9UJA5 497 aaKnown RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 GMEB2Q9UKD1 530 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PRDM4Q9UKN5 801 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SLC12A4Q9UP95 1085 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 SLC8A2Q9UPR5 921 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 UBE2J1Q9Y385 318 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 U3KQV3 271 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ANAPC1Q9H1A4 1944 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 A0A096LPK6 155 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 TRAV19A0A0A6YYK7 116 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 C5orf51A6NDU8 294 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 TMEM114B3SHH9 223 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 F8WDY8 70 aa4.88□□□□□ -1.63
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