RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ESX1Q8N693 406 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PLPP5Q8NEB5 264 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 TNIP2Q8NFZ5 429 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 OR8J3Q8NGG0 315 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 GOT1L1Q8NHS2 421 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 CIDECQ96AQ7 238 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PHF12Q96QT6 1004 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 CSF3RQ99062 836 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 ALOXE3Q9BYJ1 711 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 WDR54Q9H977 334 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 IL1RL2Q9HB29 575 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SPAG4Q9NPE6 437 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SLC52A3Q9NQ40 469 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 MAP10Q9P2G4 905 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 C19orf25Q9UFG5 118 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 RAPGEFL1Q9UHV5 662 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PRPF19Q9UMS4 504 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SATB2Q9UPW6 733 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 EXO1Q9UQ84 846 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SNX8Q9Y5X2 465 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 B3GALT1Q9Y5Z6 326 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 KNTC1P50748 2209 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 IGLV3-12A0A075B6K2 115 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 CFAP73A6NFT4 308 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 FAM227AF5H4B4 570 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SCN2BO60939 215 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 LDB3O75112 727 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 DNAJB6O75190 326 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 GMNNO75496 209 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SOX30O94993 753 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 TIAF1O95411 115 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ABCB1P08183 1280 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 IFI6P09912 130 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ZGLP1P0C6A0 271 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 CPMP14384 443 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 NT5EP21589 574 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 UQCRC2P22695 453 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 RORAP35398 523 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SOAT1P35610 550 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 CHI3L1P36222 383 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 PGM1P36871 562 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ETV5P41161 510 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 MAGEA8P43361 318 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 EMP2P54851 167 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 WNT3P56703 355 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 RPS15P62841 145 aaKnown RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 GABREP78334 506 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SLC25A3Q00325 362 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 TP53BP2Q13625 1128 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ERV3-1Q14264 604 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 CEBPEQ15744 281 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SYT16Q17RD7 645 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ZNF385BQ569K4 471 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 PAGE3Q5JUK9 113 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SAMD4BQ5PRF9 694 aaKnown RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 LRIF1Q5T3J3 769 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 TMEM64Q6YI46 380 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 RIPOR1Q6ZS17 1223 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ANKRD46Q86W74 232 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 DEFB107AQ8IZN7 70 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ST13P4Q8IZP2 240 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 GALNT6Q8NCL4 622 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 RBM15BQ8NDT2 890 aaKnown RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 OR56A1Q8NGH5 318 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 STT3BQ8TCJ2 826 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SFXN5Q8TD22 340 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 DAZLQ92904 295 aaKnown RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 AMDHD1Q96NU7 426 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 CGREF1Q99674 301 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ECSITQ9BQ95 431 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 THUMPD3Q9BV44 507 aaKnown RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 SLC26A1Q9H2B4 701 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 LRMDAQ9H2I8 198 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 GLIPR2Q9H4G4 154 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 THUMPD1Q9NXG2 353 aaKnown RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 TAS2R1Q9NYW7 299 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 ADA2Q9NZK5 511 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 C5AR2Q9P296 337 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 BCAP29Q9UHQ4 241 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 MKL2Q9ULH7 1088 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 TMEM184BQ9Y519 407 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-218ENST00000556343 PCDHB14Q9Y5E9 798 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 PCDHGA7Q9Y5G6 932 aa8.66□□□□□ -1.02
ACTN1-218ENST00000556343 TMEM247A6NEH6 219 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 VSTM2BA6NLU5 285 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 STMND1H3BQB6 276 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CLIC1O00299 241 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PLOD2O00469 737 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 EMC8O43402 210 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 FGF17O60258 216 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 BRINP1O60477 761 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PRKRAO75569 313 aaKnown RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CDC123O75794 336 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CIB2O75838 187 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ATP1B1P05026 303 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 RAB40ALP0C0E4 278 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 C8orf89P0DMQ9 161 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms