RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 FAAH2Q6GMR7 532 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 FRMPD2BQ6IN97 320 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 LCN10Q6JVE6 187 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 KLC3Q6P597 504 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TLDC1Q6P9B6 456 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SHISA6Q6ZSJ9 500 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TRMT10CQ7L0Y3 403 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 THOC6Q86W42 341 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 MYLK4Q86YV6 388 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 DNAJC22Q8N4W6 341 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TBC1D19Q8N5T2 526 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SLC38A9Q8NBW4 561 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 OR2A1Q8NGT9 310 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 STAG3L4Q8TBR4 150 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 DENND1AQ8TEH3 1009 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 KCTD4Q8WVF5 259 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 NEU4Q8WWR8 484 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ATP6V1E2Q96A05 226 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 MMABQ96EY8 250 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SLC35A4Q96G79 324 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 RUFY1Q96T51 708 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 HAUS8Q9BT25 410 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 EFHD1Q9BUP0 239 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ALOXE3Q9BYJ1 711 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 PCBD2Q9H0N5 130 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 MRPL46Q9H2W6 279 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ALG9Q9H6U8 611 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 LHX9Q9NQ69 397 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 CUTCQ9NTM9 273 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TMEM184CQ9NVA4 438 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 KCND3Q9UK17 655 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 IKZF3Q9UKT9 509 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 PTPRQQ9UMZ3 2332 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SLC22A14Q9Y267 594 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 BTRCQ9Y297 605 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 MED16Q9Y2X0 877 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 PTRH2Q9Y3E5 179 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TMEM184BQ9Y519 407 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 AP1M2Q9Y6Q5 423 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 GTF3C1Q12789 2109 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ZGRF1Q86YA3 2104 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 CNTRLQ7Z7A1 2325 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 A0A087X1B8 175 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 IQANK1A0A1B0GTG1 560 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ANKDD1BA6NHY2 528 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 UNC119BA6NIH7 251 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 FOXO6A8MYZ6 492 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 UBXN8O00124 270 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 EIF3FO00303 357 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 PEX12O00623 359 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 HAT1O14929 419 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ZSCAN9O15535 394 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 AKAP8O43823 692 aaKnown RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 LCMT2O60294 686 aaKnown RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 SRPX2O60687 465 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 CTSVO60911 334 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 SMIM24O75264 130 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 CREG1O75629 220 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 C2P06681 752 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 UQCRHP07919 91 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 SNRPAP09012 282 aaKnown RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 PCNAP12004 261 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 CD1DP15813 335 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF37AP17032 561 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 WT1P19544 449 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 F8A1P23610 371 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 PTPN4P29074 926 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 FOLR3P41439 243 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 CCR10P46092 362 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 AVPR1BP47901 424 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 SERPINB8P50452 374 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 SERPINB9P50453 376 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 AP1S2P56377 157 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ATP6V0D1P61421 351 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 TBPL1P62380 186 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ABATP80404 500 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 MC1RQ01726 317 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF844Q08AG5 666 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ILF2Q12905 390 aaKnown RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 NAB1Q13506 487 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 GBX1Q14549 363 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 NAA25Q14CX7 972 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 OR4D1Q15615 310 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 HIST2H2ACQ16777 129 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-238ENST00000556288 NDUFA9Q16795 377 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 PFKFB4Q16877 469 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 ERCC6LQ2NKX8 1250 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 HKDC1Q2TB90 917 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 XKR6Q5GH73 641 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 TCTE1Q5JU00 501 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 NXNQ6DKJ4 435 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 HIST2H2AA3Q6FI13 130 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 SULT1C3Q6IMI6 304 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 CYS1Q717R9 158 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 RHOUQ7L0Q8 258 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 GALNT7Q86SF2 657 aa4.41□□□□□ -1.7
ATXN3-238ENST00000556288 FAM90A1Q86YD7 464 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms