RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 LACC1Q8IV20 430 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 RCOR2Q8IZ40 523 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 PPFIBP2Q8ND30 876 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 OR8K1Q8NGG5 319 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 OR6P1Q8NGX9 317 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 NEIL3Q8TAT5 605 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 ALG3Q92685 438 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 VMP1Q96GC9 406 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SCYL1Q96KG9 808 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SGCZQ96LD1 299 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 CCDC77Q9BR77 488 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 FAM129AQ9BZQ8 928 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 P2RY12Q9H244 342 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 GOLPH3Q9H4A6 298 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 LRRC40Q9H9A6 602 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 NHEJ1Q9H9Q4 299 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 LIN28AQ9H9Z2 209 aaKnown RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 ACKR4Q9NPB9 350 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SEMA4BQ9NPR2 832 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 NECTIN3Q9NQS3 549 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 FAM114A2Q9NRY5 505 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 ABCF3Q9NUQ8 709 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SAMD15Q9P1V8 674 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 MYOTQ9UBF9 498 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SLC2A6Q9UGQ3 507 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 RIMKLBQ9ULI2 386 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 HYOU1Q9Y4L1 999 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 DSCAMO60469 2012 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 A0A087X1B8 175 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 PSTPIP1O43586 416 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 CD5LO43866 347 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 GALR3O60755 368 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 PSIP1O75475 530 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 SLC16A8O95907 504 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 PTMAP06454 111 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 RBP3P10745 1247 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 MAOAP21397 527 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 RPS3P23396 243 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 CTNNA2P26232 953 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ATP5DP30049 168 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 DNASE1L1P49184 302 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ADARP55265 1226 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ACVR1Q04771 509 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 GBX1Q14549 363 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 SLC18A3Q16572 532 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 AARS2Q5JTZ9 985 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 TSTD2Q5T7W7 516 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 NSUN5P2Q63ZY6 315 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 CAPN13Q6MZZ7 669 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 DARS2Q6PI48 645 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 FAM47EQ6ZV65 393 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ABHD13Q7L211 337 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 LRRC6Q86X45 466 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 CDKL3Q8IVW4 592 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 RHOT2Q8IXI1 618 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 MAPK1IP1LQ8NDC0 245 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ACTL9Q8TC94 416 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF480Q8WV37 535 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 NCLNQ969V3 563 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 HSPBAP1Q96EW2 488 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 C16orf45Q96MC5 204 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 RASL10BQ96S79 203 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 WDR83Q9BRX9 315 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 MCMBPQ9BTE3 642 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 AARSD1Q9BTE6 412 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 C19orf24Q9BVV8 132 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 RBM24Q9BX46 236 aaKnown RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 HEMGNQ9BXL5 484 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 UBTD1Q9HAC8 227 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 YAE1D1Q9NRH1 226 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 SACM1LQ9NTJ5 587 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 TUBA8Q9NY65 449 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 C6orf203Q9P0P8 240 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 NDRG3Q9UGV2 375 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 ATG4BQ9Y4P1 393 aa6.28□□□□□ -1.4
ATXN3-236ENST00000556220 EPN1Q9Y6I3 576 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-236ENST00000556220 CD8B2A6NJW9 211 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 DEFB108AA8MXU0 73 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 WWP2O00308 870 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 PJA2O43164 708 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 PSMD3O43242 534 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 CTIFO43310 598 aaKnown RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 SPOPO43791 374 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 METTL18O95568 372 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 CATP04040 527 aaKnown RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 P04436 131 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 SLC35G6P0C7Q6 338 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 FAM157CP0CG43 387 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 ALOX12P18054 663 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 CHRM3P20309 590 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 COILP38432 576 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 GIPRP48546 466 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 TTPAP49638 278 aa6.27□□□□□ -1.41
ATXN3-236ENST00000556220 EIF3EP60228 445 aaKnown RBP6.27□□□□□ -1.41
ATXN3-236ENST00000556220 SKP1P63208 163 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms