RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 IL33O95760 270 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 RETP07949 1114 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 SRCP12931 536 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 AZGP1P25311 298 aaKnown RBP10.27□□□□□ -0.76
ACTN1-216ENST00000556083 SPINT3P49223 89 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 DCAF7P61962 342 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 CST6Q15828 149 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 GFOD2Q3B7J2 385 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 NANOGP8Q6NSW7 305 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 HS3ST5Q8IZT8 346 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 SIX5Q8N196 739 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 ACBD7Q8N6N7 88 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 TMEM174Q8WUU8 243 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 DDIT4LQ96D03 193 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 HSD3B7Q9H2F3 369 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 NANOGQ9H9S0 305 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 GNG8Q9UK08 70 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 SLC6A5Q9Y345 797 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 SPEF1Q9Y4P9 236 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 A0A075B6Q4 140 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CXorf49A8MYA2 514 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 OR2B3O76000 313 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 EDN1P05305 212 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 FGF4P08620 206 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 HNRNPA2B1P22626 353 aaKnown RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CCND3P30281 292 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 NOVP48745 357 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 DGKQP52824 942 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 ADAM17P78536 824 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TSTQ16762 297 aaKnown RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 DCAF12L1Q5VU92 463 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 DPY19L3Q6ZPD9 716 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 KIAA0907Q7Z7F0 614 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 PDSS2Q86YH6 399 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF584Q8IVC4 421 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 MRGPRX2Q96LB1 330 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 PCDHAC1Q9H158 963 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 BTNL2Q9UIR0 455 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 OR6C74A6NCV1 312 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 C2orf71A6NGG8 1288 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 HEPACAM2A8MVW5 462 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TPST2O60704 377 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 IFNA2P01563 188 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 ICAM2P13598 275 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 IRF2P14316 349 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 NELFEP18615 380 aaKnown RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CRABP1P29762 137 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 DLX2Q07687 328 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CHAF1BQ13112 559 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CMPK2Q5EBM0 449 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CLEC12AQ5QGZ9 265 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 OR4C11Q6IEV9 310 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 LCTLQ6UWM7 567 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 UBQLNLQ8IYU4 475 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 SPERTQ8NA61 448 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 ACVR1CQ8NER5 493 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 FNDC8Q8TC99 324 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CERS4Q9HA82 394 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 KLHL13Q9P2N7 655 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 A0A1W2PQU0 124 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 SAP18O00422 153 aaKnown RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 HCRTR2O43614 444 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 POLR2CP19387 275 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TAS2R38P59533 333 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 RNF220Q5VTB9 566 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 HACD4Q5VWC8 232 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 UGT2A3Q6UWM9 527 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF765Q7L2R6 523 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 SCGB1C1Q8TD33 95 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TRMT2BQ96GJ1 504 aaKnown RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 ZC3H10Q96K80 434 aaKnown RBP10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CDK15Q96Q40 435 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 FAM129BQ96TA1 746 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 SPIN2AQ99865 258 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 SPIN2BQ9BPZ2 258 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 CCDC32Q9BV29 185 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 SLC5A7Q9GZV3 580 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TXNRD2Q9NNW7 524 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 KCNIP1Q9NZI2 227 aa10.27□□□□□ -0.77
ACTN1-216ENST00000556083 TTC34A8MYJ7 566 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 PRAMEF26H0Y7S4 382 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 BLOC1S5-TXNDC5H3BN57 136 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 TULP2O00295 520 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ITM2AO43736 263 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 MAFKO60675 156 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 MT-ND1P03886 318 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 GATMP50440 423 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 AKR1D1P51857 326 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 OGDHQ02218 1023 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF613Q6PF04 617 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 BLOC1S3Q6QNY0 202 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 TSPYL5Q86VY4 417 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 OR52P1PQ8NH57 321 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ARL5BQ96KC2 179 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SH2B3Q9UQQ2 575 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 TRAPPC13A5PLN9 417 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 NAP1L6A6NFF2 107 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms