RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FGF22Q9HCT0 170 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 WASH6PQ9NQA3 447 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FAM120CQ9NX05 1096 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TRNAU1APQ9NX07 287 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GFOD1Q9NXC2 390 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ACTR3BQ9P1U1 418 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 USP36Q9P275 1121 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TAC3Q9UHF0 121 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 DLGAP4Q9Y2H0 992 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 AP4S1Q9Y587 144 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CFAP20Q9Y6A4 193 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TCRBV3S1A0A5B6 114 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PRR19A6NJB7 356 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ZNF891A8MT65 544 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 EVPLLA8MZ36 301 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 H3BNX3 289 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CASQ2O14958 399 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 GSTA4O15217 222 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PEX1O43933 1283 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PCDH7O60245 1069 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 LRATO95237 230 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TGFB1P01137 390 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 UMPSP11172 480 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ACADSP16219 412 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TACR1P25103 407 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PSMA4P25789 261 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 HTR1EP28566 365 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CMPK1P30085 196 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PKLRP30613 574 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SLC7A1P30825 629 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TIA1P31483 386 aaKnown RBP eCLIP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SHMT2P34897 504 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SRP54P61011 504 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 RAC1P63000 192 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 MRPS22P82650 360 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 BNC1Q01954 994 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PRDX1Q06830 199 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CLCA4Q14CN2 919 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TRIP10Q15642 601 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 RUNDC3AQ59EK9 446 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CMPK2Q5EBM0 449 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 RABL3Q5HYI8 236 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 LRIF1Q5T3J3 769 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CPTPQ5TA50 214 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 IRAK1BP1Q5VVH5 260 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 LYSMD4Q5XG99 296 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ICE2Q659A1 982 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 LCN8Q6JVE9 175 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 DUS1LQ6P1R4 473 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 GALNT18Q6P9A2 607 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CYP2R1Q6VVX0 501 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 Q6ZSR6 202 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 R3HCC1LQ7Z5L2 792 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 IFNEQ86WN2 208 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 FAM129CQ86XR2 697 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PRIMA1Q86XR5 153 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PTRH1Q86Y79 214 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 DCP2Q8IU60 420 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ZC3H7AQ8IWR0 971 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 RIMKLAQ8IXN7 391 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 RNF175Q8N4F7 328 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 LMNTD1Q8N9Z9 388 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 GPR156Q8NFN8 814 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TTLQ8NG68 377 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 OR4K1Q8NGD4 311 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CDC26Q8NHZ8 85 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 NRG4Q8WWG1 115 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 OR1E3Q8WZA6 343 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 CXorf40BQ96DE9 158 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 MTERF3Q96E29 417 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SLC45A3Q96JT2 553 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ACAT2Q9BWD1 397 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 VCXQ9H320 206 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 KIR3DX1Q9H7L2 352 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 IL21RQ9HBE5 538 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 DMRT3Q9NQL9 472 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PRDM8Q9NQV8 689 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 TMEM184CQ9NVA4 438 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ATAD3AQ9NVI7 634 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SLAMF8Q9P0V8 285 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 MAGEL2Q9UJ55 1249 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SNX7Q9UNH6 387 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SH2B3Q9UQQ2 575 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 WDR37Q9Y2I8 494 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 WBP11Q9Y2W2 641 aaKnown RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PLEKHM1Q9Y4G2 1056 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 SNX13Q9Y5W8 968 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 LRP4O75096 1905 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ACANP16112 2415 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 HEATR5BQ9P2D3 2071 aa6.48□□□□□ -1.37
SLIRP-204ENST00000555890 ARID1BQ8NFD5 2236 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-204ENST00000555890 PRSS51A0A1B0GVH4 220 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 A0A1W2PPV9 198 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 TRBC2A0A5B9 178 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ARHGAP10A1A4S6 786 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR5K4A6NMS3 321 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 H7BY64 318 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms