RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 HSPB3Q12988 150 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 RPA4Q13156 261 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 NFE2L1Q14494 772 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 DUSP7Q16829 419 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 FNDC3BQ53EP0 1204 aaKnown RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 RPS26P11Q5JNZ5 115 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 SAXO2Q658L1 398 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 ZNF770Q6IQ21 691 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 TNFAIP8L2Q6P589 184 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 DEF8Q6ZN54 512 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 GDPGP1Q6ZNW5 385 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 RTL10Q7L3V2 364 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 NUDT13Q86X67 352 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 LRRC56Q8IYG6 542 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 SLC34A3Q8N130 599 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 ZNF740Q8NDX6 193 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 ST13P5Q8NFI4 369 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 VN1R2Q8NFZ6 395 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 TRIM43Q96BQ3 446 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 ZBED6CLQ96FA7 236 aaPredicted RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 TMEM80Q96HE8 168 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 TMEM19Q96HH6 336 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 IL4I1Q96RQ9 567 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 SLC30A2Q9BRI3 323 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 CCDC32Q9BV29 185 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 ACAT2Q9BWD1 397 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 SORBS1Q9BX66 1292 aaKnown RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 PCBD2Q9H0N5 130 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 POLR2J3Q9H1A7 115 aaKnown RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 SPNS1Q9H2V7 528 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 PELI2Q9HAT8 420 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 EXOSC4Q9NPD3 245 aaKnown RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 IL23AQ9NPF7 189 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 SACM1LQ9NTJ5 587 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 TAS2R16Q9NYV7 291 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 EHD3Q9NZN3 535 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 SEC14L3Q9UDX4 400 aa6.65□□□□□ -1.34
TDP1-213ENST00000555880 RPL36Q9Y3U8 105 aaKnown RBP6.65□□□□□ -1.34
TDP1-213ENST00000555880 DSPPQ9NZW4 1301 aa6.65□□□□□ -1.35
TDP1-213ENST00000555880 PLXND1Q9Y4D7 1925 aa6.65□□□□□ -1.35
TDP1-213ENST00000555880 NUP210Q8TEM1 1887 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 A0A075B6Q4 140 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TRBV4-1A0A0J9YWV2 114 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 PLPP1O14494 284 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 MYL12BO14950 172 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 RGS5O15539 181 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLC28A2O43868 658 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TBX19O60806 448 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ENTPD6O75354 484 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SCG5P05408 212 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ELAVL4P26378 380 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 ACADLP28330 430 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 GTF2E2P29084 291 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 CTHP32929 405 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLC15A1P46059 708 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ANXA11P50995 505 aaKnown RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 LIM2P55344 173 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 DPTQ07507 201 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ILKQ13418 452 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TP53BP2Q13625 1128 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ARHGAP19Q14CB8 494 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 DHCR24Q15392 516 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 NDUFA9Q16795 377 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CCDC92Q53HC0 331 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 SOWAHCQ53LP3 525 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 ATAD3BQ5T9A4 648 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SLX4IPQ5VYV7 408 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 PLPP4Q5VZY2 271 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 C19orf48Q6RUI8 117 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SZRD1Q7Z422 152 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 C6orf120Q7Z4R8 191 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 AMZ2Q86W34 360 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 MMP21Q8N119 569 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 CYP4Z2PQ8N1L4 340 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 RAB42Q8N4Z0 105 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 LINC00471Q8N535 108 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 HORMAD2Q8N7B1 307 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 LMNTD1Q8N9Z9 388 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 FAM83FQ8NEG4 500 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 TMIEQ8NEW7 156 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 OR8J1Q8NGP2 316 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 OR5AR1Q8NGP9 310 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TFGQ92734 400 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 RGMAQ96B86 450 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 TMCO6Q96DC7 493 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 VWCEQ96DN2 955 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ZNF354BQ96LW1 612 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 IL17FQ96PD4 163 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 OR5M11Q96RB7 305 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 KCNS3Q9BQ31 491 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SPATA5L1Q9BVQ7 753 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ZDHHC5Q9C0B5 715 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 PITHD1Q9GZP4 211 aaPredicted RBP6.64□□□□□ -1.35
TDP1-213ENST00000555880 RHBGQ9H310 441 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 RNF167Q9H6Y7 350 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 C3orf14Q9HBI5 128 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 PRDM8Q9NQV8 689 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 ZSCAN32Q9NX65 697 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 P2RX2Q9UBL9 471 aa6.64□□□□□ -1.35
TDP1-213ENST00000555880 SEC14L4Q9UDX3 406 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms