RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 C9orf172C9J069 976 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 C9JVG2 144 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 CYR61O00622 381 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 GYG2O15488 501 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 PRKRAO75569 313 aaKnown RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 UNC5CO95185 931 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 MED26O95402 600 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 STAMBPO95630 424 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 GPR75O95800 540 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 ABCB1P08183 1280 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 ZGLP1P0C6A0 271 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 C8orf89P0DMQ9 161 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 LAMP1P11279 417 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 CPMP14384 443 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 TNNI3P19429 210 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 CAPN3P20807 821 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 NT5EP21589 574 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 SLC5A2P31639 672 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 TRPC1P48995 793 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 XKP51811 444 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 DGKQP52824 942 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 MLC1Q15049 377 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 SYT16Q17RD7 645 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 DNAJC14Q6Y2X3 702 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 YTHDF3Q7Z739 585 aaKnown RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 ZC3H7AQ8IWR0 971 aaKnown RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 PRSS58Q8IYP2 241 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 ST13P4Q8IZP2 240 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 DNAJB14Q8TBM8 379 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 TEX37Q96LM6 180 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 CCDC115Q96NT0 180 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 ARL8BQ9NVJ2 186 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
SHMT2-220ENST00000555634 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 TAS2R9Q9NYW1 312 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 COPS7AQ9UBW8 275 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 L3MBTL1Q9Y468 752 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 CCDC88CQ9P219 2028 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 IGLV3-12A0A075B6K2 115 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 TMEM247A6NEH6 219 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 FGF17O60258 216 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 RAD1O60671 282 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 LDB3O75112 727 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 COQ9O75208 318 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 CPSF4O95639 269 aaKnown RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 KRT75O95678 551 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 DLGAP3O95886 979 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 ONECUT2O95948 504 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 ATP1B1P05026 303 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 RAB40ALP0C0E4 278 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 SLC35E2P0CK97 266 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF28P17035 718 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 IL12AP29459 219 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 FEN1P39748 380 aaKnown RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 CPA2P48052 419 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 TP53BP2Q13625 1128 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 NSDHLQ15738 373 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 SLC2A7Q6PXP3 512 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 HACD2Q6Y1H2 254 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 MED25Q71SY5 747 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 ANKRD46Q86W74 232 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 TREML1Q86YW5 311 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 GALNT12Q8IXK2 581 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 OR56A1Q8NGH5 318 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 DAZLQ92904 295 aaKnown RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 SLC46A1Q96NT5 459 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 NPAS2Q99743 824 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 HOPXQ9BPY8 73 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 GPR87Q9BY21 358 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 CHST8Q9H2A9 424 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 SOX17Q9H6I2 414 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 SPAG4Q9NPE6 437 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 ADAP2Q9NPF8 381 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 FOXJ2Q9P0K8 574 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 C5AR2Q9P296 337 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 C3orf18Q9UK00 162 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 PTRH2Q9Y3E5 179 aaKnown RBP10.52□□□□□ -0.73
SHMT2-220ENST00000555634 CLCA3PQ9Y6N3 262 aa10.52□□□□□ -0.73
SHMT2-220ENST00000555634 CNOT1A5YKK6 2376 aaKnown RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 RNF103-CHMP3A0A140T963 221 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 MYO1GB0I1T2 1018 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 B2RBV5 119 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 IDSB3KWA1 339 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 FAM227AF5H4B4 570 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 PGRMC2O15173 223 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 DNAJA2O60884 412 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 BCAS2O75934 225 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 DXOO77932 396 aaKnown RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 C6orf47O95873 294 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 IFI6P09912 130 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 LIPCP11150 499 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 TCN2P20062 427 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 MAOAP21397 527 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 GALNSP34059 522 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 DLSTP36957 453 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms