RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CPN2P22792 545 aa10□□□□□ -0.81
TDP1-212ENST00000555565 SERPINB1P30740 379 aa10□□□□□ -0.81
TDP1-212ENST00000555565 SSR2P43308 183 aa10□□□□□ -0.81
TDP1-212ENST00000555565 NUP107P57740 925 aa10□□□□□ -0.81
TDP1-212ENST00000555565 RNF4P78317 190 aa10□□□□□ -0.81
TDP1-212ENST00000555565 SLC7A5Q01650 507 aa10□□□□□ -0.81
TDP1-212ENST00000555565 PMPCAQ10713 525 aa10□□□□□ -0.81
TDP1-212ENST00000555565 DDX39BQ13838 428 aaKnown RBP10□□□□□ -0.81
TDP1-212ENST00000555565 MROH9Q5TGP6 573 aa10□□□□□ -0.81
TDP1-212ENST00000555565 OR4C11Q6IEV9 310 aa10□□□□□ -0.81
TDP1-212ENST00000555565 LIX1LQ8IVB5 337 aa10□□□□□ -0.81
TDP1-212ENST00000555565 OR4N5Q8IXE1 308 aa10□□□□□ -0.81
TDP1-212ENST00000555565 GPALPP1Q8IXQ4 340 aa10□□□□□ -0.81
TDP1-212ENST00000555565 TEX9Q8N6V9 391 aa10□□□□□ -0.81
TDP1-212ENST00000555565 OR52N2Q8NGI0 321 aa10□□□□□ -0.81
TDP1-212ENST00000555565 OR8K3Q8NH51 312 aa10□□□□□ -0.81
TDP1-212ENST00000555565 HUS1BQ8NHY5 278 aa10□□□□□ -0.81
TDP1-212ENST00000555565 SLC2A12Q8TD20 617 aa10□□□□□ -0.81
TDP1-212ENST00000555565 ASB15Q8WXK1 588 aa10□□□□□ -0.81
TDP1-212ENST00000555565 MRRFQ96E11 262 aaKnown RBP10□□□□□ -0.81
TDP1-212ENST00000555565 GPATCH1Q9BRR8 931 aaKnown RBP10□□□□□ -0.81
TDP1-212ENST00000555565 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
TDP1-212ENST00000555565 CLEC4MQ9H2X3 399 aaPredicted RBP10□□□□□ -0.81
TDP1-212ENST00000555565 SLC24A3Q9HC58 644 aa10□□□□□ -0.81
TDP1-212ENST00000555565 PRM3Q9NNZ6 103 aa10□□□□□ -0.81
TDP1-212ENST00000555565 ZDHHC18Q9NUE0 388 aa10□□□□□ -0.81
TDP1-212ENST00000555565 PHF3Q92576 2039 aaKnown RBP10□□□□□ -0.81
TDP1-212ENST00000555565 STAB1Q9NY15 2570 aa10□□□□□ -0.81
TDP1-212ENST00000555565 A0A087X1B8 175 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 SYCE1LA8MT33 242 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 PLPP1O14494 284 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 CDC40O60508 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
TDP1-212ENST00000555565 PDE9AO76083 593 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 ALDOAP04075 364 aaKnown RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 INHBBP09529 407 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 DNASE1P24855 282 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 PIK3CBP42338 1070 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 STT3AP46977 705 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 SLAMF1Q13291 335 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 SETDB1Q15047 1291 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 PFKFB4Q16877 469 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 FAM83EQ2M2I3 478 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 ZNF750Q32MQ0 723 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 UBAP2Q5T6F2 1119 aaKnown RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 ARHGAP11AQ6P4F7 1023 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 TAOK1Q7L7X3 1001 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 CXXC5Q7LFL8 322 aaKnown RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 CAMKMTQ7Z624 323 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 CCDC91Q7Z6B0 441 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 CDC20BQ86Y33 519 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 MYLK4Q86YV6 388 aaPredicted RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 ZZZ3Q8IYH5 903 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 CLYBLQ8N0X4 340 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 OR2M7Q8NG81 312 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 ZNF721Q8TF20 911 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 RGMAQ96B86 450 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 SENP5Q96HI0 755 aaPredicted RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 SCYL1Q96KG9 808 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 GPR78Q96P69 363 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 MTERF1Q99551 399 aaKnown RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 LRRC1Q9BTT6 524 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 ZNF717Q9BY31 904 aaPredicted RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 TP63Q9H3D4 680 aaPredicted RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 RPF2Q9H7B2 306 aaKnown RBP9.99□□□□□ -0.81
TDP1-212ENST00000555565 DMRT3Q9NQL9 472 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 SNX15Q9NRS6 342 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 ADGRE2Q9UHX3 823 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 TSC22D4Q9Y3Q8 395 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 ATG4BQ9Y4P1 393 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 SPACA6W5XKT8 324 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 RTTNQ86VV8 2226 aa9.99□□□□□ -0.81
TDP1-212ENST00000555565 FREM3P0C091 2139 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 A0A096LPK6 155 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 CCDC189A1A4V9 331 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 FAM166BA8MTA8 275 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 G3V3Y1 287 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 H0YIV9 168 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 HRKO00198 91 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 GLSO94925 669 aaPredicted RBP9.98□□□□□ -0.81
TDP1-212ENST00000555565 KLHL2O95198 593 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 IGKV3-11P04433 115 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 HEXAP06865 529 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 GFAPP14136 432 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 COX7A2P14406 83 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 CNR1P21554 472 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 RAP1GDS1P52306 607 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 ALDH18A1P54886 795 aaKnown RBP9.98□□□□□ -0.81
TDP1-212ENST00000555565 HNRNPH2P55795 449 aaKnown RBP9.98□□□□□ -0.81
TDP1-212ENST00000555565 RPS13P62277 151 aaKnown RBP9.98□□□□□ -0.81
TDP1-212ENST00000555565 PPIAP62937 165 aaKnown RBP9.98□□□□□ -0.81
TDP1-212ENST00000555565 SNTB1Q13884 538 aaKnown RBP9.98□□□□□ -0.81
TDP1-212ENST00000555565 ACAP2Q15057 778 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 PCBP2Q15366 365 aaKnown RBP eCLIP9.98□□□□□ -0.81
TDP1-212ENST00000555565 LIPJQ5W064 366 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 C18orf63Q68DL7 685 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 C8orf74Q6P047 294 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 ARSKQ6UWY0 536 aa9.98□□□□□ -0.81
TDP1-212ENST00000555565 CLEC9AQ6UXN8 241 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms