RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ST6GALNAC5Q9BVH7 336 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 NMUR2Q9GZQ4 415 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 LMAN1LQ9HAT1 526 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 NTN4Q9HB63 628 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 RAB26Q9ULW5 256 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 TMED7Q9Y3B3 224 aa1.67□□□□□ -2.14
SRP54-207ENST00000555535 SLC15A5A6NIM6 579 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 FAM86B1E9PN63 330 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 FAM86B2P0C5J1 330 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 IL11P20809 199 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 ARHGDIAP52565 204 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 HYAL4Q2M3T9 481 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 QRICH1Q2TAL8 776 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 UNC50Q53HI1 259 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 TXNRD3NBQ6F5E7 133 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 TMEM182Q6ZP80 229 aaPredicted RBP1.66□□□□□ -2.14
SRP54-207ENST00000555535 ENOSF1Q7L5Y1 443 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 CREBRFQ8IUR6 639 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 TIGD4Q8IY51 512 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 C16orf58Q96GQ5 468 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 NAA11Q9BSU3 229 aaPredicted RBP1.66□□□□□ -2.14
SRP54-207ENST00000555535 WWP1Q9H0M0 922 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 ZNF702PQ9H963 129 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 ELL3Q9HB65 397 aaPredicted RBP1.66□□□□□ -2.14
SRP54-207ENST00000555535 PATZ1Q9HBE1 687 aaKnown RBP1.66□□□□□ -2.14
SRP54-207ENST00000555535 TIGARQ9NQ88 270 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 FAM212BQ9NTI7 297 aaPredicted RBP1.66□□□□□ -2.14
SRP54-207ENST00000555535 TAS2R16Q9NYV7 291 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 ETV7Q9Y603 341 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 PTCH1Q13635 1447 aa1.66□□□□□ -2.14
SRP54-207ENST00000555535 DFNA5O60443 496 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 CSDE1O75534 798 aaKnown RBP1.65□□□□□ -2.15
SRP54-207ENST00000555535 IGHV3-9P01782 118 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 HNRNPA2B1P22626 353 aaKnown RBP1.65□□□□□ -2.15
SRP54-207ENST00000555535 PPOXP50336 477 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 MFAP2P55001 183 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 FKBP1BP68106 108 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 OVGP1Q12889 678 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 PRPF4BQ13523 1007 aaKnown RBP1.65□□□□□ -2.15
SRP54-207ENST00000555535 KCTD2Q14681 263 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 IQCCQ4KMZ1 466 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 NHSL2Q5HYW2 709 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 ZNF658Q5TYW1 1059 aaPredicted RBP1.65□□□□□ -2.15
SRP54-207ENST00000555535 SLC22A10Q63ZE4 541 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 CCAR2Q8N163 923 aaKnown RBP1.65□□□□□ -2.15
SRP54-207ENST00000555535 LYPD1Q8N2G4 141 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 RNF149Q8NC42 400 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 RIT1Q92963 219 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 STARD4Q96DR4 205 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 UBA5Q9GZZ9 404 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 PDRG1Q9NUG6 133 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 KIAA1217Q5T5P2 1943 aa1.65□□□□□ -2.15
SRP54-207ENST00000555535 ARID4BQ4LE39 1312 aaPredicted RBP1.65□□□□□ -2.15
SRP54-207ENST00000555535 IGLV8-61A0A075B6I0 122 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 GTPBP10A4D1E9 387 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 MFSD2BA6NFX1 497 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 CCDC188H7C350 402 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 NUDT21O43809 227 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 CA11O75493 328 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 CLN5O75503 358 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 GRAP2O75791 330 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 WISP3O95389 354 aaPredicted RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 FUT3P21217 361 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 GLRA1P23415 457 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 MTIF2P46199 727 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 CD47Q08722 323 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 CAMK2DQ13557 499 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 COG2Q14746 738 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 KYNUQ16719 465 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 KRT80Q6KB66 452 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 CAPN13Q6MZZ7 669 aaPredicted RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 TATDN1Q6P1N9 297 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 ALKBH5Q6P6C2 394 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 DNAJB7Q7Z6W7 309 aaPredicted RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 WDR49Q8IV35 697 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 ERI1Q8IV48 349 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 GVQW1Q8N7I0 195 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 TCP11Q8WWU5 503 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 MRPL24Q96A35 216 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 PCED1BQ96HM7 432 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 RAB40CQ96S21 281 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 SLC25A39Q9BZJ4 359 aaPredicted RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 CXXC4Q9H2H0 198 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 RNF41Q9H4P4 317 aaPredicted RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 ADGRL4Q9HBW9 690 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 APOBEC3BQ9UH17 382 aaKnown RBP1.64□□□□□ -2.15
SRP54-207ENST00000555535 ZNF175Q9Y473 711 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 PFASO15067 1338 aa1.64□□□□□ -2.15
SRP54-207ENST00000555535 LTBP1Q14766 1721 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 IGLV3-16A0A075B6K0 115 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 ANXA2P2A6NMY6 339 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 EEF2KO00418 725 aaKnown RBP1.63□□□□□ -2.15
SRP54-207ENST00000555535 UBE2CO00762 179 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 CCSO14618 274 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 SERF1AO75920 110 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 GGPS1O95749 300 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 AKR1B1P15121 316 aa1.63□□□□□ -2.15
SRP54-207ENST00000555535 RPS2P15880 293 aaKnown RBP1.63□□□□□ -2.15
SRP54-207ENST00000555535 PSMB1P20618 241 aaKnown RBP1.63□□□□□ -2.15
SRP54-207ENST00000555535 IDSP22304 550 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms