RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	DIAPH2	O60879	1101 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	CEACAM4	O75871	244 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	BCKDHA	P12694	445 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	SDC1	P18827	310 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	FBL	P22087	321 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	CERS1	P27544	350 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	EPHA3	P29320	983 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	GALNS	P34059	522 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	DLST	P36957	453 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	SEC24C	P53992	1094 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	CLDN8	P56748	225 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	SNRPN	P63162	240 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	IGLV3-21	P80748	117 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	TNFRSF17	Q02223	184 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	OCA2	Q04671	838 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	KLC1	Q07866	573 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	PDE7A	Q13946	482 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	ERV3-1	Q14264	604 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	NCF4	Q15080	339 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	INPP5J	Q15735	1006 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	CEBPE	Q15744	281 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	DPY19L1	Q2PZI1	675 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	EIF2S3L	Q2VIR3	472 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	KRTAP21-3	Q3LHN1	58 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	LSM12	Q3MHD2	195 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	SLC9B1	Q4ZJI4	515 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	PRAMEF17	Q5VTA0	474 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	FAM71E1	Q6IPT2	247 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	FAM198B	Q6UWH4	519 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	QSOX2	Q6ZRP7	698 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	SPATA21	Q7Z572	469 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	R3HCC1L	Q7Z5L2	792 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	SCUBE1	Q8IWY4	988 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	RIMKLA	Q8IXN7	391 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	CPSF7	Q8N684	471 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	GLB1L3	Q8NCI6	653 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	GALNT6	Q8NCL4	622 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	PLPP5	Q8NEB5	264 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	OR2Y1	Q8NGV0	311 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	ZCCHC10	Q8TBK6	192 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	C16orf78	Q8WTQ4	265 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	TSPEAR	Q8WU66	669 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	C10orf82	Q8WW14	230 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	TESC	Q96BS2	214 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	TM4SF18	Q96CE8	201 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	CCT8L2	Q96SF2	557 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	RABEP2	Q9H5N1	569 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	WDR55	Q9H6Y2	383 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	WDR41	Q9HAD4	459 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	RYDEN	Q9NUL5	291 aa	Known RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	AIG1	Q9NVV5	245 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	IFT80	Q9P2H3	777 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	ATP6V1H	Q9UI12	483 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	KCND3	Q9UK17	655 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	PSME2	Q9UL46	239 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	DLGAP4	Q9Y2H0	992 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	ATG4B	Q9Y4P1	393 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	PCDHA9	Q9Y5H5	950 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	GPR45	Q9Y5Y3	372 aa		9.03	□□□□□ -0.96
PRKCH-215	ENST00000555382	IGKV3D-11	A0A0A0MRZ8	115 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	GNG14	A0A1W2PPG7	69 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382		A0A1W2PR48	441 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	DYTN	A2CJ06	578 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	PSMD12	O00232	456 aa	Predicted RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	RTCA	O00442	366 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	UBD	O15205	165 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	CTNS	O60931	367 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	RDH16	O75452	317 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	CREG1	O75629	220 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	KLF7	O75840	302 aa	Predicted RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	IGHE	P01854	428 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	STATH	P02808	62 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	FH	P07954	510 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	ALDOC	P09972	364 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	ZGLP1	P0C6A0	271 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	NR2F6	P10588	404 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	DDC	P20711	480 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	XCR1	P46094	333 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	OR1D4	P47884	311 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	ARFIP2	P53365	341 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	CLNS1A	P54105	237 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	HNRNPH2	P55795	449 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	RPS15	P62841	145 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	RPL38	P63173	70 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	LRRC74A	Q0VAA2	488 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	SERTAD2	Q14140	314 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	NKG7	Q16617	165 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	GALNTL6	Q49A17	601 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	PDCD4	Q53EL6	469 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	NDUFAF5	Q5TEU4	345 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	VWA5B1	Q5TIE3	1220 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	IL23R	Q5VWK5	629 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	OR52E8	Q6IFG1	317 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	ZC3H7A	Q8IWR0	971 aa	Known RBP	9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	TMEM132C	Q8N3T6	1108 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	RFWD2	Q8NHY2	731 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	DNAJB14	Q8TBM8	379 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	STT3B	Q8TCJ2	826 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	COQ8B	Q96D53	544 aa		9.02	□□□□□ -0.97
PRKCH-215	ENST00000555382	IP6K3	Q96PC2	410 aa		9.02	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms