RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ANKMY2Q8IV38 441 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 PTCD3Q96EY7 689 aaKnown RBP12.04□□□□□ -0.48
XRCC3-212ENST00000555231 KCNC2Q96PR1 638 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 NAP1L3Q99457 506 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-212ENST00000555231 TIMP4Q99727 224 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 TBCDQ9BTW9 1192 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 DOHHQ9BU89 302 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 PITHD1Q9GZP4 211 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-212ENST00000555231 DDX47Q9H0S4 455 aaKnown RBP12.04□□□□□ -0.48
XRCC3-212ENST00000555231 EHD1Q9H4M9 534 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 PLEKHF2Q9H8W4 249 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 QPCTLQ9NXS2 382 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 CAMK2AQ9UQM7 478 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 SLC6A5Q9Y345 797 aa12.04□□□□□ -0.48
XRCC3-212ENST00000555231 CHCHD2Q9Y6H1 151 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-212ENST00000555231 AHRRA9YTQ3 701 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 PRKRAO75569 313 aaKnown RBP12.03□□□□□ -0.48
XRCC3-212ENST00000555231 TRAPPC6AO75865 159 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 ACSL3O95573 720 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 PCNAP12004 261 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 EPORP19235 508 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 HIST1H1TP22492 207 aaPredicted RBP12.03□□□□□ -0.48
XRCC3-212ENST00000555231 HOXC12P31275 282 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 SSR2P43308 183 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 DCAF7P61962 342 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 HERVK_113P63132 956 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 ERVK-8P63133 956 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 IGLV3-21P80748 117 aaPredicted RBP12.03□□□□□ -0.48
XRCC3-212ENST00000555231 IRF8Q02556 426 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 MGAT5Q09328 741 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 CHIT1Q13231 466 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 AP5B1Q2VPB7 878 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 STEAP4Q687X5 459 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 BICRALQ6AI39 1079 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 TAOK1Q7L7X3 1001 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 MAATS1Q7Z4T9 603 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 KRTAP1-3Q8IUG1 177 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 LACC1Q8IV20 430 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 PDIK1LQ8N165 341 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 VWA5B2Q8N398 1253 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 RNF175Q8N4F7 328 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 ZNF473Q8WTR7 871 aaKnown RBP12.03□□□□□ -0.48
XRCC3-212ENST00000555231 DIO2Q92813 273 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 WDR34Q96EX3 536 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 TRIB1Q96RU8 372 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 KRT12Q99456 494 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 EFCAB11Q9BUY7 163 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 NEUROD4Q9HD90 331 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 CNIH4Q9P003 139 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 ZNF629Q9UEG4 869 aaPredicted RBP12.03□□□□□ -0.48
XRCC3-212ENST00000555231 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
XRCC3-212ENST00000555231 ERVK-19Q9WJR5 959 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 TEX264Q9Y6I9 313 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 MED12Q93074 2177 aa12.03□□□□□ -0.48
XRCC3-212ENST00000555231 EXPH5Q8NEV8 1989 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 WASHC1A8K0Z3 465 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 CLCA1A8K7I4 914 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 EEF1E1O43324 174 aaKnown RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 DYRK3O43781 588 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 CCNT2O60583 730 aaKnown RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 STK16O75716 305 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 PIAS1O75925 651 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 C1QAP02745 245 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 FBXO45P0C2W1 286 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 IVDP26440 423 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 SERPINB3P29508 390 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 TIMP3P35625 211 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 GGT5P36269 586 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 SLAMF1Q13291 335 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 LAPTM5Q13571 262 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 ZNF267Q14586 743 aaPredicted RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 PDK4Q16654 411 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 HIST2H2ACQ16777 129 aaPredicted RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 PAGE2BQ5JRK9 111 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 C18orf63Q68DL7 685 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 HIST2H2AA3Q6FI13 130 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 SLC29A4Q7RTT9 530 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 KIF18BQ86Y91 864 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 GPSM1Q86YR5 675 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 TCAIMQ8N3R3 496 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 SLC15A4Q8N697 577 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 BBOF1Q8ND07 529 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 EXT2Q93063 718 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 RBM18Q96H35 190 aaKnown RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 FBXL20Q96IG2 436 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 VPS39Q96JC1 886 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 ART5Q96L15 291 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 ZNF597Q96LX8 424 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 YIPF4Q9BSR8 244 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 PHACTR1Q9C0D0 580 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 DERL2Q9GZP9 239 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 OR51B5Q9H339 312 aa12.02□□□□□ -0.49
XRCC3-212ENST00000555231 RPF2Q9H7B2 306 aaKnown RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 CNOT10Q9H9A5 744 aaKnown RBP12.02□□□□□ -0.49
XRCC3-212ENST00000555231 CAB39LQ9H9S4 337 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms