RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FKBP3Q00688 224 aaKnown RBP4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 FASTKQ14296 549 aaKnown RBP4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 TAF1BQ53T94 588 aaPredicted RBP4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 C1orf186Q6ZWK4 172 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 ITIH5Q86UX2 942 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 WDR49Q8IV35 697 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 Q8NBF4 154 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 COLGALT1Q8NBJ5 622 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 PRSS33Q8NF86 280 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 LRRC15Q8TF66 581 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 PCNPQ8WW12 178 aaKnown RBP4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 ESAMQ96AP7 390 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 SLC45A3Q96JT2 553 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 STRADBQ9C0K7 418 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 SP140LQ9H930 580 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 WDR41Q9HAD4 459 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 PIN4Q9Y237 131 aaKnown RBP4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 SH3PXD2BA1X283 911 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 MEI4A8MW99 385 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 FBP2O00757 339 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 PRPSAP2O60256 369 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 MT-ATP6P00846 226 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 SLC1A6P48664 564 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 ATXN3P54252 364 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 PEX3P56589 373 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 RPL27P61353 136 aaKnown RBP4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 SRPXP78539 464 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 IL1RL1Q01638 556 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 ELAVL2Q12926 359 aaKnown RBP4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 LY6DQ14210 128 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 ZNF146Q15072 292 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 P2RY14Q15391 338 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 TEX35Q5T0J7 233 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 OLFM4Q6UX06 510 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 GSG1LQ6UXU4 331 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 MCM10Q7L590 875 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 KCNMB4Q86W47 210 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 CARM1Q86X55 608 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 FAM131BQ86XD5 332 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 RDH11Q8TC12 318 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 ANKRD27Q96NW4 1050 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 FAM111AQ96PZ2 611 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 TNFRSF13CQ96RJ3 184 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 COQ7Q99807 217 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 ATG10Q9H0Y0 220 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 CXXC4Q9H2H0 198 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 MOB1AQ9H8S9 216 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 HPS4Q9NQG7 708 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 NINJ2Q9NZG7 142 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 THYN1Q9P016 225 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 CC2D2AQ9P2K1 1620 aa4.49□□□□□ -1.69
CKS1BP1-201ENST00000555221 BCLAF3A2AJT9 711 aaKnown RBP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ARHGEF33A8MVX0 844 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 NEDD8-MDP1E9PL57 170 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ZNF749O43361 778 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 TSPAN2O60636 221 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 SNAP91O60641 907 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 LRP3O75074 770 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 FCER2P06734 321 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 KRT5P13647 590 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ETS1P14921 441 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 CCL11P51671 97 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 RPS27AP62979 156 aaKnown RBP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 SMC1AQ14683 1233 aaKnown RBP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 SLC17A1Q14916 467 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 CMPK2Q5EBM0 449 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 DCAF12Q5T6F0 453 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 OR6B2Q6IFH4 312 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 CWC27Q6UX04 472 aaKnown RBP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 WDR88Q6ZMY6 472 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 RBM43Q6ZSC3 357 aaKnown RBP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ASRGL1Q7L266 308 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 SLC22A16Q86VW1 577 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 RNF130Q86XS8 419 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ELMOD2Q8IZ81 293 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 NPRL2Q8WTW4 380 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 TAAR6Q96RI8 345 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 NACA2Q9H009 215 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 HSD3B7Q9H2F3 369 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 DEPPQ9NTK1 212 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 THAP10Q9P2Z0 257 aaPredicted RBP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 SPASTQ9UBP0 616 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 NIP7Q9Y221 180 aaKnown RBP eCLIP4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ENTPD4Q9Y227 616 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 ATAD2BQ9ULI0 1458 aa4.48□□□□□ -1.69
CKS1BP1-201ENST00000555221 IGLV4-3A0A075B6K6 122 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 LOC390937A0A1W2PQ73 354 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 IGLON5A6NGN9 336 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 NTN3O00634 580 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 RASGRF2O14827 1237 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 STAM2O75886 525 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 ARF4P18085 180 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 CAPGP40121 348 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 ASMTP46597 345 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 RIDAP52758 137 aaKnown RBP4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 NDST1P52848 882 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 BPIFB3P59826 476 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 NME3Q13232 169 aa4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 SHROOM1Q2M3G4 852 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP1-201ENST00000555221 MUC21Q5SSG8 566 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms