RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FBXW2Q9UKT8 454 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 MAN2B2Q9Y2E5 1009 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 POLR3HQ9Y535 204 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 FAM234BA2RU67 622 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PRMT3O60678 531 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 JRKO75564 520 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 SLC22A3O75751 556 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PRPS2P11908 318 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 WT1P19544 449 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-218ENST00000555213 MAPK1P28482 360 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 TIA1P31483 386 aaKnown RBP eCLIP10.25□□□□□ -0.77
SHMT2-218ENST00000555213 HSD17B7P56937 341 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 TRA2BP62995 288 aaKnown RBP10.25□□□□□ -0.77
SHMT2-218ENST00000555213 SLC25A3Q00325 362 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PTGR1Q14914 329 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 NSDHLQ15738 373 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PRSS53Q2L4Q9 553 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 VPS26BQ4G0F5 336 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 FAM69BQ5VUD6 431 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 OR52E8Q6IFG1 317 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 MED25Q71SY5 747 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 GPR155Q7Z3F1 870 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PPP1R32Q7Z5V6 425 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PARP9Q8IXQ6 854 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 TSPEARQ8WU66 669 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 SNRNP27Q8WVK2 155 aaKnown RBP10.25□□□□□ -0.77
SHMT2-218ENST00000555213 RCN3Q96D15 328 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 FER1L6-AS2Q96M78 137 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 NPAS2Q99743 824 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 MAPKAP1Q9BPZ7 522 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 PRTFDC1Q9NRG1 225 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 LANCL2Q9NS86 450 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 ERVK-11Q9UQG0 969 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 EIF3LQ9Y262 564 aaKnown RBP10.25□□□□□ -0.77
SHMT2-218ENST00000555213 TMED5Q9Y3A6 229 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 SEC16AO15027 2179 aa10.25□□□□□ -0.77
SHMT2-218ENST00000555213 FER1L5A0AVI2 2057 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 FAM208BQ5VWN6 2430 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 CYR61O00622 381 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 TMPRSS11DO60235 418 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 HNRNPCL1O60812 293 aaKnown RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 SCN2BO60939 215 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 GBAP04062 536 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 ITGB2P05107 769 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 KRT16P08779 473 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 ANXA4P09525 319 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 NQO1P15559 274 aaKnown RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 TPP2P29144 1249 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 POLR2JP52435 117 aaKnown RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 DGKQP52824 942 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 FOXL2P58012 376 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 C21orf58P58505 322 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 AP2B1P63010 937 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 RHAGQ02094 409 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 ZNF763Q0D2J5 394 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 STX4Q12846 297 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 MAD2L1Q13257 205 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 ATP1A4Q13733 1029 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 RCAN2Q14206 197 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 RPS6KA2Q15349 733 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 DEFB109BQ30KR1 87 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 PAGE3Q5JUK9 113 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 ATP1A1-AS1Q5TC04 95 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 IRAK1BP1Q5VVH5 260 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 FAAH2Q6GMR7 532 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 MRM1Q6IN84 353 aaKnown RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 PGM2L1Q6PCE3 622 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 LAPTM4BQ86VI4 370 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 TMEM102Q8N9M5 508 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 CLEC1AQ8NC01 280 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 ADAMTS17Q8TE56 1095 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 TANKQ92844 425 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 VPS33AQ96AX1 596 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 KLHL29Q96CT2 875 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 PTCHD1Q96NR3 888 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 CSF3RQ99062 836 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 EBPLQ9BY08 206 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 CLMPQ9H6B4 373 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 RPF2Q9H7B2 306 aaKnown RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 MRGBPQ9NV56 204 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 P4HTMQ9NXG6 502 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 KCMF1Q9P0J7 381 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 SLAMF8Q9P0V8 285 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 FBXL4Q9UKA2 621 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
SHMT2-218ENST00000555213 HS3ST3B1Q9Y662 390 aa10.24□□□□□ -0.77
SHMT2-218ENST00000555213 PKD1L2Q7Z442 2459 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 NSG1A0A0A6YYJ2 146 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 A0A1W2PP18 115 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 C1orf226A1L170 272 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 FAM227AF5H4B4 570 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 AIM2O14862 343 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 CTNSO60931 367 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 DNAJB6O75190 326 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 AIFM1O95831 613 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 HPP00738 406 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 COX7A2P14406 83 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 MAOAP21397 527 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 WNT3P56703 355 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 STX1BP61266 288 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms