RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 AURKAIP1Q9NWT8 199 aaPredicted RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 GPRC5BQ9NZH0 403 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 JKAMPQ9P055 326 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 TMEM9Q9P0T7 183 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ZDHHC2Q9UIJ5 367 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 HAO1Q9UJM8 370 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CLCA2Q9UQC9 943 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 KLHL20Q9Y2M5 609 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 RNF11Q9Y3C5 154 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ANGPTL3Q9Y5C1 460 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 KLK4Q9Y5K2 254 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 KCNE2Q9Y6J6 123 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CFAP54Q96N23 3096 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PIEZO1Q92508 2521 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 MN1Q10571 1320 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 A0A0J9YY10 115 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 OR2A25A4D2G3 310 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CDHR4A6H8M9 788 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 TLCD2A6NGC4 264 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 TMEM233B4DJY2 109 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FAM227AF5H4B4 570 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 NTN3O00634 580 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CLGNO14967 610 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 DUX1O43812 170 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 PRAMEF10O60809 474 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CCNDBP1O95273 360 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CLDN9O95484 217 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ESRRBO95718 433 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 HSPA4LO95757 839 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 OTCP00480 354 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 C9P02748 559 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 RPLP0P05388 317 aaKnown RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 GP1BAP07359 652 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 EBLN1P0CF75 366 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ST6GAL1P15907 406 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 RHCEP18577 417 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ZFP36P26651 326 aaKnown RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FOXA1P55317 472 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 GNGT1P63211 74 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 REEP5Q00765 189 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 RHDQ02161 417 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 IRF8Q02556 426 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 PRKAA1Q13131 559 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FOXE3Q13461 319 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 TBCCQ15814 346 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 UGT3A2Q3SY77 523 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 GGTA1PQ4G0N0 100 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 XKR6Q5GH73 641 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 LIPJQ5W064 366 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ATG9BQ674R7 924 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FCRL6Q6DN72 434 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 GRHL2Q6ISB3 625 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 IRGCQ6NXR0 463 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FIGLAQ6QHK4 219 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 WDR74Q6RFH5 385 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FAM92BQ6ZTR7 304 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 FAM47EQ6ZV65 393 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 MTERF4Q7Z6M4 381 aaKnown RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 GLRX5Q86SX6 157 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CUZD1Q86UP6 607 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 KIAA2013Q8IYS2 634 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 LRRC34Q8IZ02 419 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF781Q8N8C0 355 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF740Q8NDX6 193 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 DEFB124Q8NES8 71 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ATP6V1E2Q96A05 226 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 GRAMD1AQ96CP6 724 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 C7orf26Q96N11 449 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 PRAP1Q96NZ9 151 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 TGM7Q96PF1 710 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 TRAPPC9Q96Q05 1148 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 KCNA7Q96RP8 456 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CD180Q99467 661 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 DPH7Q9BTV6 452 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 CAPS2Q9BXY5 557 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ILKAPQ9H0C8 392 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 EHD1Q9H4M9 534 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 SYNPO2LQ9H987 977 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 PELI2Q9HAT8 420 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 EML4Q9HC35 981 aaKnown RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 TMEM184CQ9NVA4 438 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 SEMA5BQ9P283 1151 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ADAM21Q9UKJ8 722 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF490Q9ULM2 529 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-212ENST00000554486 RAP2CQ9Y3L5 183 aa5.99□□□□□ -1.45
SCFD1-212ENST00000554486 SPEGQ15772 3267 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 SCN3AQ9NY46 2000 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 IGHV5-51A0A0C4DH38 117 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 TRBC2A0A5B9 178 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 FEZF1A0PJY2 475 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 SLC9B1P1A6NJY1 282 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 HAT1O14929 419 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 AZIN1O14977 448 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 ZW10O43264 779 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 HCRTR1O43613 425 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 LCMT2O60294 686 aaKnown RBP5.98□□□□□ -1.45
SCFD1-212ENST00000554486 UGDHO60701 494 aa5.98□□□□□ -1.45
SCFD1-212ENST00000554486 EDF1O60869 148 aaKnown RBP5.98□□□□□ -1.45
SCFD1-212ENST00000554486 SHOX2O60902 331 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-212ENST00000554486 CTSVO60911 334 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms