RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 TADA1Q96BN2 335 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 NTNG2Q96CW9 530 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 KIR2DL4Q99706 377 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 ITPAQ9BY32 194 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 VCXQ9H320 206 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 HPS4Q9NQG7 708 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 INPP5EQ9NRR6 644 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 ABCC13Q9NSE7 274 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 TBC1D22BQ9NU19 505 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 IRAK4Q9NWZ3 460 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 RNF150Q9ULK6 438 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 CA5BQ9Y2D0 317 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 MAGI3Q5TCQ9 1506 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 ABCC2Q92887 1545 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 GPATCH8Q9UKJ3 1502 aaKnown RBP0.72□□□□□ -2.29
KTN1-211ENST00000553710 HMCN2Q8NDA2 5059 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
KTN1-211ENST00000553710 FANCD2Q9BXW9 1451 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 TNRC6CQ9HCJ0 1690 aaKnown RBP0.72□□□□□ -2.29
KTN1-211ENST00000553710 THSD7AQ9UPZ6 1657 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 KIAA1217Q5T5P2 1943 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 DICER1Q9UPY3 1922 aaKnown RBP0.72□□□□□ -2.29
KTN1-211ENST00000553710 TECTAO75443 2155 aa0.72□□□□□ -2.29
KTN1-211ENST00000553710 SPTBN1Q01082 2364 aaKnown RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 CCDC180Q9P1Z9 1646 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CNTRLQ7Z7A1 2325 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 COL18A1P39060 1754 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 KIDINS220Q9ULH0 1771 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 KCPQ6ZWJ8 1503 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 PRRC2BQ5JSZ5 2229 aaKnown RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 A0A0G2JLM5 398 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 MFSD2BA6NFX1 497 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 C17orf105B2RV13 164 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 ADAMDEC1O15204 470 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 SERF1AO75920 110 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 GSRP00390 522 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 PDGFBP01127 241 aaPredicted RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 IGKV4-1P06312 121 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CSN3P07498 182 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 SLC35E2P0CK97 266 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 TBPP20226 339 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 FUT3P21217 361 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CCNE1P24864 410 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 TM4SF1P30408 202 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 DUTP33316 252 aaKnown RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 GARSP41250 739 aaKnown RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 EVCP57679 992 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 ZNF45Q02386 682 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 ORC2Q13416 577 aaPredicted RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 ASAH1Q13510 395 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 PRR4Q16378 134 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 SNAPC1Q16533 368 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 LY6EQ16553 131 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 RBBP7Q16576 425 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 RAB41Q5JT25 222 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 TTC27Q6P3X3 843 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CCDC71Q8IV32 467 aaPredicted RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 CCDC63Q8NA47 563 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 FEVQ99581 238 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 GPR88Q9GZN0 384 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 PRMT7Q9NVM4 692 aaPredicted RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 IMPAD1Q9NX62 359 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 SAGE1Q9NXZ1 904 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CLIC5Q9NZA1 410 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 ORC3Q9UBD5 711 aaPredicted RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 DBF4Q9UBU7 674 aaPredicted RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 SLC24A2Q9UI40 661 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CCPG1Q9ULG6 757 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 TMEM98Q9Y2Y6 226 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 KMT2AQ03164 3969 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 CUL7Q14999 1698 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 ZC3H13Q5T200 1668 aaKnown RBP0.71□□□□□ -2.3
KTN1-211ENST00000553710 ABCC5O15440 1437 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 TRAPPC8Q9Y2L5 1435 aa0.71□□□□□ -2.3
KTN1-211ENST00000553710 NEBP20929 6669 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 MROH2BQ7Z745 1585 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 FMN2Q9NZ56 1722 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 FANCAO15360 1455 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 CFTRP13569 1480 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 MAGI1Q96QZ7 1491 aaPredicted RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 LOC102723996A0A087X1L8 192 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 A0A1B0GUA9 196 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 EFCAB7A8K855 629 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 AP3D1O14617 1153 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 KIF5CO60282 957 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 SCGB1D1O95968 90 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 IGHG3P01860 377 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 MT-ND2P03891 347 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 OR9G9P0C7N8 305 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 P4HA1P13674 534 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 CD22P20273 847 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 PPP2R1AP30153 589 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 POLR2LP62875 67 aaKnown RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 SETQ01105 290 aaPredicted RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 MAP2K1Q02750 393 aaPredicted RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 CD47Q08722 323 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 SF3A2Q15428 464 aaKnown RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 LRRC37A5PQ49AS3 106 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 C14orf28Q4W4Y0 310 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms