RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SCIMPQ6UWF3 145 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 LYPD8Q6UX82 237 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 TAOK1Q7L7X3 1001 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 MILR1Q7Z6M3 343 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 DAZLQ92904 295 aaKnown RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 TMEM125Q96AQ2 219 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 NTMT1Q9BV86 223 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 DEFB127Q9H1M4 99 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 HPF1Q9NWY4 346 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 ZNF835Q9Y2P0 537 aa16.87■□□□□ 0.29
SHMT2-206ENST00000553529 YARS2Q9Y2Z4 477 aaKnown RBP16.87■□□□□ 0.29
SHMT2-206ENST00000553529 A0A1B0GUH1 482 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 KIF2AO00139 706 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-206ENST00000553529 NME6O75414 186 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-206ENST00000553529 PYGBP11216 843 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 CUL3Q13618 768 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 SERTAD2Q14140 314 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 CYP20A1Q6UW02 462 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 TIFABQ6ZNK6 161 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 TRMT10CQ7L0Y3 403 aaKnown RBP16.86■□□□□ 0.29
SHMT2-206ENST00000553529 NUDT13Q86X67 352 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 SPPL2CQ8IUH8 684 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 HORMAD2Q8N7B1 307 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 CDYL2Q8N8U2 506 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 MAGED4Q96JG8 741 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 GAL3ST4Q96RP7 486 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 ADGRE2Q9UHX3 823 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 PHF11Q9UIL8 331 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 SLC12A4Q9UP95 1085 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 SPACA6W5XKT8 324 aa16.86■□□□□ 0.29
SHMT2-206ENST00000553529 CCDC189A1A4V9 331 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 PRSS44E7EML9 344 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 C19orf84I3L1E1 186 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 FOXE1O00358 373 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-206ENST00000553529 ADAM10O14672 748 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 TFECO14948 347 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-206ENST00000553529 SNRPB2P08579 225 aaKnown RBP16.85■□□□□ 0.29
SHMT2-206ENST00000553529 COL6A2P12110 1019 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 CNTFP26441 200 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 SOX18P35713 384 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 HSD17B3P37058 310 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 PIGAP37287 484 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 FOXA1P55317 472 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 TBL3Q12788 808 aaKnown RBP16.85■□□□□ 0.29
SHMT2-206ENST00000553529 RCN2Q14257 317 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 ZNF678Q5SXM1 525 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 PRAMEF20Q5VT98 475 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 COMMD6Q7Z4G1 85 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 MRGPRGQ86SM5 289 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 OR2M7Q8NG81 312 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 OR5M3Q8NGP4 307 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 EPS8L3Q8TE67 593 aaKnown RBP16.85■□□□□ 0.29
SHMT2-206ENST00000553529 AGAP11Q8TF27 550 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 REPS1Q96D71 796 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 TNFRSF12AQ9NP84 129 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 DTX4Q9Y2E6 619 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 KLF13Q9Y2Y9 288 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-206ENST00000553529 TIMM22Q9Y584 194 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 MAST4O15021 2626 aa16.85■□□□□ 0.29
SHMT2-206ENST00000553529 SUPT7LO94864 414 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 GPR75O95800 540 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 BUD31P41223 144 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 PHEXP78562 749 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 PLIN5Q00G26 463 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 CLCQ05315 142 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 DUSP8Q13202 625 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 GGTA1PQ4G0N0 100 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 Q6ZPB1 254 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 DOLPP1Q86YN1 238 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 METTL4Q8N3J2 472 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 MARVELD2Q8N4S9 558 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 ZFP62Q8NB50 900 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 FAM98AQ8NCA5 519 aaKnown RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 SELENOMQ8WWX9 145 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 TANKQ92844 425 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 SERPINI1Q99574 410 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 CENPKQ9BS16 269 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 C1QTNF3Q9BXJ4 246 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 TTTY12Q9BZ98 90 aa16.84■□□□□ 0.29
SHMT2-206ENST00000553529 LYARQ9NX58 379 aaKnown RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 TUBA8Q9NY65 449 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 NCOA6Q14686 2063 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-206ENST00000553529 MANBAO00462 879 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 UBFD1O14562 309 aaKnown RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 OR10H2O60403 315 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 ABOP16442 354 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 PER3P56645 1201 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 SLC37A1P57057 533 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 IFT88Q13099 833 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 LTB4RQ15722 352 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 NNATQ16517 81 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 CCNYL2Q5T2Q4 361 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 NDUFAF5Q5TEU4 345 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 BICRALQ6AI39 1079 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 FAM111BQ6SJ93 734 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 SH2D5Q6ZV89 423 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 CD163Q86VB7 1156 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 PRR22Q8IZ63 422 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms