RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MBLAC1A4D2B0 266 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 RNF222A6NCQ9 220 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 SRRM4A7MD48 611 aaKnown RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 SLC1A7O00341 560 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 KIAA0513O60268 411 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 FGF19O95750 216 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 CAVIN2O95810 425 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 FSHBP01225 129 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 VTNP04004 478 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 ANXA4P09525 319 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 CEACAM8P31997 349 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 TAGLN2P37802 199 aaKnown RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 CDR2Q01850 454 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 ZNF74Q16587 644 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 PARP6Q2NL67 630 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 RABGAP1LQ5R372 815 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 ATP1A1-AS1Q5TC04 95 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 DPY19L2P2Q6ZN68 376 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 LHFPL4Q7Z7J7 247 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 GPBP1Q86WP2 473 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 PELI3Q8N2H9 469 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 NIPA2Q8N8Q9 360 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 DDHD1Q8NEL9 900 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 OR1L3Q8NH93 324 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 PNPT1Q8TCS8 783 aaKnown RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 ZG16BQ96DA0 208 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 IGSF21Q96ID5 467 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 HPDLQ96IR7 371 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 C10orf90Q96M02 699 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 VSTM2LQ96N03 204 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 IL17FQ96PD4 163 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 ACCSQ96QU6 501 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 PLIN2Q99541 437 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 NKX3-1Q99801 234 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 GSDMCQ9BYG8 508 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 NLNQ9BYT8 704 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 LRRCC1Q9C099 1032 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 BICC1Q9H694 974 aaKnown RBP5.12□□□□□ -1.59
SCFD1-208ENST00000553278 MED17Q9NVC6 651 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 GDAP2Q9NXN4 497 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 RNF14Q9UBS8 474 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 CLEC4AQ9UMR7 237 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 OR10H1Q9Y4A9 318 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 RNF123Q5XPI4 1314 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 PTPRUQ92729 1446 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 IGHV4-61A0A0C4DH41 118 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 SH3PXD2BA1X283 911 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 ZSCAN5BA6NJL1 495 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 WASH3PC4AMC7 463 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 C16orf97H3BN30 126 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 SDHDO14521 159 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 KLF11O14901 512 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CFLARO15519 480 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 DCXO43602 365 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 ANP32DO95626 131 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 IGHV4-59P01825 116 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 EDN1P05305 212 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 GSTA1P08263 222 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 SLC2A2P11168 524 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 RPL35AP18077 110 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CA8P35219 290 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 FEN1P39748 380 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 RGS4P49798 205 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 AIF1P55008 147 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 PPIAP62937 165 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CNTN2Q02246 1040 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 KIF5AQ12840 1032 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 EXOSC2Q13868 293 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 IMMTQ16891 758 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 LRIT3Q3SXY7 679 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 ACSF3Q4G176 576 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 FAM106AQ4KMX7 169 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 TECRLQ5HYJ1 363 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 TRIM65Q6PJ69 517 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 WASH2PQ6VEQ5 465 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 LEKR1Q6ZMV7 388 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 Q6ZRG5 221 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CCDC36Q8IYA8 594 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 MARVELD2Q8N4S9 558 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 C8orf46Q8TAG6 207 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 APOBEC4Q8WW27 367 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 SORCS1Q8WY21 1168 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 FBXO32Q969P5 355 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 AZIN2Q96A70 460 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 DHTKD1Q96HY7 919 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 TPD52L3Q96J77 140 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CNOT6LQ96LI5 555 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 INPP4AQ96PE3 977 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 DCTN5Q9BTE1 182 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CRNKL1Q9BZJ0 848 aaKnown RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 SCAND2PQ9GZW5 306 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CALHM2Q9HA72 323 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 UBE2TQ9NPD8 197 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 ERRFI1Q9UJM3 462 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CAB39Q9Y376 341 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-208ENST00000553278 WIPI2Q9Y4P8 454 aa5.11□□□□□ -1.59
SCFD1-208ENST00000553278 CD8B2A6NJW9 211 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 PPIAL4DF5H284 164 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 H3BTX0 84 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 PRRG1O14668 218 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms