RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 HIP1O00291 1037 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PPP6CO00743 305 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SOCS6O14544 535 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TO15178 435 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 LDB2O43679 373 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SLC37A4O43826 429 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 DFNA5O60443 496 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SELENOFO60613 162 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ATP6V1G1O75348 118 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SERPINI2O75830 405 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 NEBLO76041 1014 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 NOL4O94818 638 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SEMA4FO95754 770 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SLC16A8O95907 504 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 IFNA2P01563 188 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 IGLV3-19P01714 112 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SERPING1P05155 500 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 KRT19P08727 400 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 DANCRP0C864 163 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 KCNE1P15382 129 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ARSBP15848 533 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 LBPP18428 481 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 POLR2CP19387 275 aaPredicted RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CD22P20273 847 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 UGT1A1P22309 533 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 APOBEC1P41238 236 aaKnown RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CD86P42081 329 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 RGS7P49802 495 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 NUDT6P53370 316 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CASP9P55211 416 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 MTCP1P56278 107 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PROK1P58294 105 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SELENOVP59797 346 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 COG7P83436 770 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SRSF4Q08170 494 aaKnown RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TRDNQ13061 729 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TNK1Q13470 666 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PDK1Q15118 436 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CDKN3Q16667 212 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF284Q2VY69 593 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 FAM174BQ3ZCQ3 159 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 AMZ1Q400G9 498 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TMEM35AQ53FP2 167 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PRR30Q53SZ7 412 aaPredicted RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF542PQ5EBM4 170 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PRR27Q6MZM9 219 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 C11orf63Q6NUN7 778 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TPGS1Q6ZTW0 290 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 OTUD6AQ7L8S5 288 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ARHGAP22Q7Z5H3 698 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 COMMD2Q86X83 199 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 BBS7Q8IWZ6 715 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 BATF2Q8N1L9 274 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ARL14Q8N4G2 192 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SLC38A9Q8NBW4 561 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 C7orf57Q8NEG2 295 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 RDM1Q8NG50 284 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 B4GALNT2Q8NHY0 566 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 THAP6Q8TBB0 222 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SCFD1Q8WVM8 642 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 SSMEM1Q8WWF3 244 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PROX1Q92786 737 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CENPTQ96BT3 561 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 BICD1Q96G01 975 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF778Q96MU6 729 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 OR1F2PQ96R84 312 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 LXNQ9BS40 222 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TRMOQ9BU70 441 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 NFKBIZQ9BYH8 718 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 OSBPL8Q9BZF1 889 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF350Q9GZX5 532 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 DDX47Q9H0S4 455 aaKnown RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 LRMDAQ9H2I8 198 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 ADNPQ9H2P0 1102 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CUEDC2Q9H467 287 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TSPY26PQ9H489 355 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 RPF1Q9H9Y2 349 aaKnown RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 MYNNQ9NPC7 610 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 GDF3Q9NR23 364 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 BLOC1S6Q9UL45 172 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 FZD10Q9ULW2 581 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 TP53TG5Q9Y2B4 290 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CA5BQ9Y2D0 317 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 AMDHD2Q9Y303 409 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 STRAPQ9Y3F4 350 aaKnown RBP3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CUBNO60494 3623 aa3.52□□□□□ -1.85
LIMA1-208ENST00000551691 CROCCQ5TZA2 2017 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 TP53BP1Q12888 1972 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 RP1P56715 2156 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SHANK1Q9Y566 2161 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF840PA6NDX5 716 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ANKRD66B4E2M5 251 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 NEDD8-MDP1E9PL57 170 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 TMEM178BH3BS89 294 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ADAM10O14672 748 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 RASGRF2O14827 1237 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 DUX1O43812 170 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 VEGFDO43915 354 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms