RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 TMIGD3P0DMS9 266 aaPredicted RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 BMP7P18075 431 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 CPN2P22792 545 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 STT3AP46977 705 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 MASP1P48740 699 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 AGFG1P52594 562 aaKnown RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 RPP38P78345 283 aaKnown RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 PLIN5Q00G26 463 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 ID2Q02363 134 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 HIST2H2ACQ16777 129 aaPredicted RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 PPP1R3AQ16821 1122 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 AP5B1Q2VPB7 878 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 PAGE2BQ5JRK9 111 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 HIST2H2AA3Q6FI13 130 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 ADAMTSL2Q86TH1 951 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 CXorf67Q86X51 503 aaPredicted RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 TMEM139Q8IV31 216 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 C9orf40Q8IXQ3 194 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 PPIL6Q8IXY8 311 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 VWA5B2Q8N398 1253 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 NANOS1Q8WY41 292 aaKnown RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 CERS2Q96G23 380 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 Q96MF0 132 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 F2RL3Q96RI0 385 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 GAL3ST4Q96RP7 486 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 SECISBP2Q96T21 854 aaKnown RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 KRT12Q99456 494 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 TBCDQ9BTW9 1192 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 EHD1Q9H4M9 534 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 CNOT10Q9H9A5 744 aaKnown RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 PRDM7Q9NQW5 492 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 JKAMPQ9P055 326 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 CHCHD2Q9Y6H1 151 aaPredicted RBP10.16□□□□□ -0.78
PFDN5-212ENST00000550880 MPDZO75970 2070 aa10.16□□□□□ -0.78
PFDN5-212ENST00000550880 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 NPEPPSL1A6NEC2 478 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 CDC7O00311 574 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 TRIM3O75382 744 aaPredicted RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ACSL3O95573 720 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 HPNP05981 417 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 CYP4B1P13584 511 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ZNF37AP17032 561 aaPredicted RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 FPR1P21462 350 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 TLX1P31314 330 aaPredicted RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 GDF5P43026 501 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 CDK9P50750 372 aaKnown RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 DIO3P55073 304 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 EEF1A1P68104 462 aaKnown RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 LAPTM5Q13571 262 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 NTRK2Q16620 822 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 TEDDM1Q5T9Z0 273 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 EEF1A1P5Q5VTE0 462 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 VASNQ6EMK4 673 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 SCIMPQ6UWF3 145 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 LYPD8Q6UX82 237 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 RNF111Q6ZNA4 994 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 YTHDF3Q7Z739 585 aaKnown RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 LUZP2Q86TE4 346 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 TCAIMQ8N3R3 496 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 NAT8LQ8N9F0 302 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ACOT4Q8N9L9 421 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 TANKQ92844 425 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ABTB1Q969K4 478 aaPredicted RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ANKRD9Q96BM1 317 aaPredicted RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 NTNG2Q96CW9 530 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 PTCD3Q96EY7 689 aaKnown RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 FBXL20Q96IG2 436 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ZFP3Q96NJ6 502 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 TM9SF2Q99805 663 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 MAPKAP1Q9BPZ7 522 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 PELOQ9BRX2 385 aaKnown RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 SFXN3Q9BWM7 321 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 ACBD3Q9H3P7 528 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 PROK2Q9HC23 129 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 MS4A12Q9NXJ0 267 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 CTNNAL1Q9UBT7 734 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 CNOT11Q9UKZ1 510 aaKnown RBP10.15□□□□□ -0.78
PFDN5-212ENST00000550880 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.78
PFDN5-212ENST00000550880 HRNRQ86YZ3 2850 aaPredicted RBP10.15□□□□□ -0.79
PFDN5-212ENST00000550880 FN1P02751 2386 aaKnown RBP10.15□□□□□ -0.79
PFDN5-212ENST00000550880 EML6Q6ZMW3 1958 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 OR6C76A6NM76 312 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 KDM4EB2RXH2 506 aaPredicted RBP10.14□□□□□ -0.79
PFDN5-212ENST00000550880 INAFM1C9JVW0 142 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 OR10H2O60403 315 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 LRATO95237 230 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 IGKV3-11P04433 115 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 HIST1H1TP22492 207 aaPredicted RBP10.14□□□□□ -0.79
PFDN5-212ENST00000550880 ATP5A1P25705 553 aaKnown RBP10.14□□□□□ -0.79
PFDN5-212ENST00000550880 CXCR5P32302 372 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 SSR2P43308 183 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 SLC6A12P48065 614 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 TMED10P49755 219 aaKnown RBP10.14□□□□□ -0.79
PFDN5-212ENST00000550880 PGGT1BP53609 377 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 TMEM35AQ53FP2 167 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 NHSL2Q5HYW2 709 aa10.14□□□□□ -0.79
PFDN5-212ENST00000550880 HLA-DQA1Q5Y7H0 255 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms