RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 EFCAB8A8MWE9 144 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 KIR3DP1A8MWS1 328 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 AQP7O14520 342 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 EIF3HO15372 352 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEK3-201ENST00000550331 PHGDHO43175 533 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 KLK8O60259 260 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 SUSD5O60279 629 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 WDR1O75083 606 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 LDB3O75112 727 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ETHE1O95571 254 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 S100BP04271 92 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 P04436 131 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CCDC166P0CW27 439 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CCL3P10147 92 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 COX7A2P14406 83 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 STMN1P16949 149 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 EPORP19235 508 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TNNI3P19429 210 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 KLK2P20151 261 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 HIST1H1TP22492 207 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 CASP2P42575 452 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 MSH2P43246 934 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 MAGEA5P43359 124 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 STT3AP46977 705 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 NR0B1P51843 470 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 PPP2R2AP63151 447 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 IGLV3-21P80748 117 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 IRF8Q02556 426 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 PCDH1Q08174 1060 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 FOXO1Q12778 655 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TBL3Q12788 808 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 CHIT1Q13231 466 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 OR4D1Q15615 310 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ZKSCAN8Q15776 578 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 HIST2H2ACQ16777 129 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 CES4AQ5XG92 561 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 HIST2H2AA3Q6FI13 130 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 B3GNT6Q6ZMB0 384 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ZNF793Q6ZN11 406 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 FAM47EQ6ZV65 393 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CYS1Q717R9 158 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TRILQ7L0X0 811 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 UBE3DQ7Z6J8 389 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TMEM200AQ86VY9 491 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TGIF2LYQ8IUE0 185 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CREG2Q8IUH2 290 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CCDC71Q8IV32 467 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 LAS2Q8IYD9 372 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 DND1Q8IYX4 353 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 SPATA6LQ8N4H0 392 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ZNF321PQ8N8H1 164 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ACOT4Q8N9L9 421 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CHDHQ8NE62 594 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 SLC22A8Q8TCC7 542 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ZNF721Q8TF20 911 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ZNF473Q8WTR7 871 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 PYROXD1Q8WU10 500 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ESAMQ96AP7 390 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ANKRD9Q96BM1 317 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 SARAFQ96BY9 339 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ART5Q96L15 291 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 RBBP8Q99708 897 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CPNE1Q99829 537 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 MAPKAP1Q9BPZ7 522 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 ZNF559Q9BR84 538 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TTYH2Q9BSA4 534 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 UCK2Q9BZX2 261 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TRIM31Q9BZY9 425 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 GSX1Q9H4S2 264 aaPredicted RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 CAB39LQ9H9S4 337 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TRMT1Q9NXH9 659 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 MS4A12Q9NXJ0 267 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 CD274Q9NZQ7 290 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 PTBP2Q9UKA9 531 aaKnown RBP7.04□□□□□ -1.28
NEK3-201ENST00000550331 ATG4BQ9Y4P1 393 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 PCDHGB3Q9Y5G1 929 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 SAR1BQ9Y6B6 198 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 TCRBV9S1A1TA0A576 114 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 FAM159BA6NKW6 160 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 CXorf49A8MYA2 514 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 G3V3Y1 287 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 M0R082 166 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 CCNT2O60583 730 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 HCN1O60741 890 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF354AO60765 605 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 IGKV3-11P04433 115 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 GLI4P10075 376 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 GABRA1P14867 456 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 CD33P20138 364 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 CPN2P22792 545 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 SSTR1P30872 391 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 DNAJA1P31689 397 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 GP5P40197 560 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PAFAH1B1P43034 410 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 SSR2P43308 183 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 RPL21P46778 160 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZFP36L2P47974 494 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 DNASE1L1P49184 302 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 MAN2A2P49641 1150 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ARFIP1P53367 373 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms