RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 FAM13CQ8NE31 585 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 CHDHQ8NE62 594 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 OR10G3Q8NGC4 313 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 TSPAN17Q96FV3 270 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 JSRP1Q96MG2 331 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 KRT12Q99456 494 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 PHACTR1Q9C0D0 580 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 CLEC4MQ9H2X3 399 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 RASSF1Q9NS23 344 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 B4GALT7Q9UBV7 327 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 RNF112Q9ULX5 631 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 BOKQ9UMX3 212 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 PLEKHA6Q9Y2H5 1048 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 VPS13CQ709C8 3753 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 S100BP04271 92 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 TCP1P17987 556 aaKnown RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 CASP2P42575 452 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 ATP6V0D1P61421 351 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 SLAMF1Q13291 335 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 E2F2Q14209 437 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 KHDRBS2Q5VWX1 349 aaKnown RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 MED27Q6P2C8 311 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 CHSY3Q70JA7 882 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 LRRC70Q7Z2Q7 622 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 CDC20BQ86Y33 519 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 LAS2Q8IYD9 372 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 NAXEQ8NCW5 288 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 OR7G3Q8NG95 312 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 NEIL3Q8TAT5 605 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 RMND5BQ96G75 393 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 FBXL20Q96IG2 436 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 GAL3ST4Q96RP7 486 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 GPR22Q99680 433 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 CD244Q9BZW8 370 aa14.17□□□□□ -0.14
RAB5C-205ENST00000550013 RPF2Q9H7B2 306 aaKnown RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 CNOT11Q9UKZ1 510 aaKnown RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 CHCHD2Q9Y6H1 151 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-205ENST00000550013 WASHC1A8K0Z3 465 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 EFCAB8A8MWE9 144 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 SYT5O00445 386 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 PROM1O43490 865 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 DYRK3O43781 588 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 FBXO45P0C2W1 286 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ALOX15P16050 662 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 STMN1P16949 149 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 BMP5P22003 454 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 SSTR1P30872 391 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 RPL21P46778 160 aaKnown RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 HNRNPH2P55795 449 aaKnown RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 HERVK_113P63132 956 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ERVK-8P63133 956 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 PPP2R2AP63151 447 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 PLIN5Q00G26 463 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 TNFRSF17Q02223 184 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 FOXD4Q12950 439 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 DDX39BQ13838 428 aaKnown RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 DEPDC1Q5TB30 811 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 OR4C11Q6IEV9 310 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 LIX1Q8N485 282 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 SLC15A4Q8N697 577 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 TNIP2Q8NFZ5 429 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 UBE2E3Q969T4 207 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 CMTM7Q96FZ5 175 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 RBM18Q96H35 190 aaKnown RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ART5Q96L15 291 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 UBXN10Q96LJ8 280 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 RBBP8Q99708 897 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 SH3GL2Q99962 352 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ERVK-6Q9BXR3 956 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 WWTR1Q9GZV5 400 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 GSX1Q9H4S2 264 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ALG9Q9H6U8 611 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ACKR4Q9NPB9 350 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 DMRT3Q9NQL9 472 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 ERVK-19Q9WJR5 959 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 SNX24Q9Y343 169 aa14.16□□□□□ -0.14
RAB5C-205ENST00000550013 MED12Q93074 2177 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 EXPH5Q8NEV8 1989 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 C15orf38-AP3S2A0A0A6YYH1 394 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 A6NNC1 897 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 HSPB2A8KAH6 182 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 PLPP1O14494 284 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 CLPSP04118 112 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 DNASE1P24855 282 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 GDF1P27539 372 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 ASCL1P50553 236 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 RAP1GDS1P52306 607 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 RAB10P61026 200 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 MRPS25P82663 173 aaKnown RBP14.15□□□□□ -0.14
RAB5C-205ENST00000550013 DLG1Q12959 904 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 ZNF267Q14586 743 aaPredicted RBP14.15□□□□□ -0.14
RAB5C-205ENST00000550013 ZKSCAN8Q15776 578 aaPredicted RBP14.15□□□□□ -0.14
RAB5C-205ENST00000550013 HSPB2Q16082 182 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 ACSF3Q4G176 576 aaPredicted RBP14.15□□□□□ -0.14
RAB5C-205ENST00000550013 FLYWCH1Q4VC44 716 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 TMEM64Q6YI46 380 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 RNF111Q6ZNA4 994 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 SLC29A4Q7RTT9 530 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 GPR180Q86V85 440 aa14.15□□□□□ -0.14
RAB5C-205ENST00000550013 CREG2Q8IUH2 290 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms