RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SLC35E2P0CK97 266 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 CPMP14384 443 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 PORP16435 677 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 ITIH1P19827 911 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 HBA1P69905 142 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 IGLV3-21P80748 117 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 STX4Q12846 297 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 TARDBPQ13148 414 aaKnown RBP eCLIP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 SLC13A2Q13183 592 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 SYT16Q17RD7 645 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 TMEM64Q6YI46 380 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 BNC2Q6ZN30 1099 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 OVCH1Q7RTY7 1134 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 SCUBE1Q8IWY4 988 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 SLC38A9Q8NBW4 561 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 FBXO27Q8NI29 283 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 UCN3Q969E3 161 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 MCUR1Q96AQ8 359 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 ANKRD9Q96BM1 317 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 MOAP1Q96BY2 351 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 ANKRD27Q96NW4 1050 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 RAB3IPQ96QF0 476 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 INPP5KQ9BT40 448 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 SLC26A1Q9H2B4 701 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 GLIPR2Q9H4G4 154 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 IL1RL2Q9HB29 575 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 LANCL2Q9NS86 450 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 IFT80Q9P2H3 777 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 CORO2BQ9UQ03 480 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 PCDHGA7Q9Y5G6 932 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 B3GALT1Q9Y5Z6 326 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 C9J4A7 227 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 GSC2O15499 205 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 FGF17O60258 216 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 B4GALT2O60909 372 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 ATP1B1P05026 303 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 HOXB9P17482 250 aaPredicted RBP16.34■□□□□ 0.21
LETMD1-220ENST00000549686 UQCRC2P22695 453 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 PTPN6P29350 595 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 GALNSP34059 522 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 GPC1P35052 558 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 FEN1P39748 380 aaKnown RBP16.34■□□□□ 0.21
LETMD1-220ENST00000549686 ETV5P41161 510 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 CLDN6P56747 220 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 RUNDC3AQ59EK9 446 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 CPZQ66K79 652 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 BHLHB9Q6PI77 547 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 ZNF621Q6ZSS3 439 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 COX15Q7KZN9 410 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 ZC3H7AQ8IWR0 971 aaKnown RBP16.34■□□□□ 0.21
LETMD1-220ENST00000549686 TMEM52Q8NDY8 209 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 FAM117AQ9C073 453 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 RAD21L1Q9H4I0 556 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 WDR54Q9H977 334 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 SLAMF7Q9NQ25 335 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 SLAMF8Q9P0V8 285 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 ABCD2Q9UBJ2 740 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 L3MBTL1Q9Y468 752 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 PCDHB14Q9Y5E9 798 aa16.34■□□□□ 0.21
LETMD1-220ENST00000549686 EVPLLA8MZ36 301 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 LDB3O75112 727 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 STK17BO94768 372 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 KRT75O95678 551 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 SLC6A2P23975 617 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 PGM1P36871 562 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 CDKN2CP42773 168 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 MAGEA8P43361 318 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 PLIN5Q00G26 463 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 HSPB3Q12988 150 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 MAP7Q14244 749 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 CAPRIN1Q14444 709 aaKnown RBP16.33■□□□□ 0.2
LETMD1-220ENST00000549686 C3orf38Q5JPI3 329 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 SAMD4BQ5PRF9 694 aaKnown RBP16.33■□□□□ 0.2
LETMD1-220ENST00000549686 NANOGP8Q6NSW7 305 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 DNAJC14Q6Y2X3 702 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-220ENST00000549686 TMPRSS7Q7RTY8 843 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 CCDC116Q8IYX3 515 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 ST13P4Q8IZP2 240 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-220ENST00000549686 SUN3Q8TAQ9 357 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 SFXN5Q8TD22 340 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF675Q8TD23 568 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 CADM1Q9BY67 442 aaKnown RBP16.33■□□□□ 0.2
LETMD1-220ENST00000549686 RBCK1Q9BYM8 510 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 NANOGQ9H9S0 305 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 SLC22A11Q9NSA0 550 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 VAPAQ9P0L0 249 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 TMEM181Q9P2C4 612 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 GPN3Q9UHW5 284 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-220ENST00000549686 SATB2Q9UPW6 733 aa16.33■□□□□ 0.2
LETMD1-220ENST00000549686 VSTM2BA6NLU5 285 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 WASHC1A8K0Z3 465 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 PLOD2O00469 737 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 OR10H2O60403 315 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ABCB1P08183 1280 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 CCNYL3P0C7X3 344 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 C8orf89P0DMQ9 161 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF28P17035 718 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 EFNA1P20827 205 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms