RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 UAP1Q16222 522 aaPredicted RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 PDK4Q16654 411 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 XKR6Q5GH73 641 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 Q5PR19 223 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ZNF585AQ6P3V2 769 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 MDGA2Q7Z553 956 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 WDR53Q7Z5U6 358 aaPredicted RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 CCDC91Q7Z6B0 441 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ZNF595Q8IYB9 648 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 KRT78Q8N1N4 520 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 PLD6Q8N2A8 252 aaKnown RBP11.27□□□□□ -0.61
DDX54-206ENST00000549271 TMEM156Q8N614 296 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 RHEBL1Q8TAI7 183 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 UBTD2Q8WUN7 234 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 FAR2Q96K12 515 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 CCDC77Q9BR77 488 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 RHBGQ9H310 441 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 ADAP2Q9NPF8 381 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 TIMMDC1Q9NPL8 285 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 NUDT4Q9NZJ9 180 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 B4GALT7Q9UBV7 327 aa11.27□□□□□ -0.61
DDX54-206ENST00000549271 A0A096LPK6 155 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 SUPT3HB4E1H0 165 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 CYR61O00622 381 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 CRLF1O75462 422 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 SUPT3HO75486 399 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 CLEC3AO75596 197 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 KLHL2O95198 593 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 S100BP04271 92 aaPredicted RBP11.26□□□□□ -0.61
DDX54-206ENST00000549271 TYK2P29597 1187 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 MAGEA12P43365 314 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 SSR4P51571 173 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 GPR85P60893 370 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 CHIT1Q13231 466 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 ACAP2Q15057 778 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 ELAVL1Q15717 326 aaKnown RBP11.26□□□□□ -0.61
DDX54-206ENST00000549271 FAM83EQ2M2I3 478 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 FBXL19-AS1Q494R0 122 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 RGS9BPQ6ZS82 235 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 LRRC70Q7Z2Q7 622 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 TMEM132CQ8N3T6 1108 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 CEP112Q8N8E3 955 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 RELL2Q8NC24 303 aaPredicted RBP11.26□□□□□ -0.61
DDX54-206ENST00000549271 NCLNQ969V3 563 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 ISL2Q96A47 359 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 PTCD3Q96EY7 689 aaKnown RBP11.26□□□□□ -0.61
DDX54-206ENST00000549271 PRTFDC1Q9NRG1 225 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 TRPS1Q9UHF7 1281 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 FBXW2Q9UKT8 454 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 NFU1Q9UMS0 254 aa11.26□□□□□ -0.61
DDX54-206ENST00000549271 MRPS33Q9Y291 106 aaKnown RBP11.26□□□□□ -0.61
DDX54-206ENST00000549271 A0A0G2JN53 185 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 A0A1B0GVC2 190 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 CCDC189A1A4V9 331 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 ANKDD1BA6NHY2 528 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 LRRC14BA6NHZ5 514 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 K7EPI3 171 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 ERI3O43414 337 aaKnown RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 B3GALT2O43825 422 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 PRKNO60260 465 aaPredicted RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 CTNSO60931 367 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 WDR1O75083 606 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 GOSR1O95249 250 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 IGHG3P01860 377 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 EPXP11678 715 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 TACR1P25103 407 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 SERPINB8P50452 374 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 IRF8Q02556 426 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 RCN2Q14257 317 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 RIPPLY2Q5TAB7 128 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 FBXW10Q5XX13 1052 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 UBE3DQ7Z6J8 389 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 LRRC75A-AS1Q8N1F1 130 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 MORN4Q8NDC4 146 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 PSD4Q8NDX1 1056 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 TMEM52Q8NDY8 209 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 C7orf57Q8NEG2 295 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 OR2L5Q8NG80 312 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 OR8K3Q8NH51 312 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 UHMK1Q8TAS1 419 aaKnown RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 DCAKDQ8WVC6 231 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 CCT6BQ92526 530 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 F2RL3Q96RI0 385 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 SERINC2Q96SA4 455 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 SMC6Q96SB8 1091 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 PAFAH2Q99487 392 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 BDH2Q9BUT1 245 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 EFCAB11Q9BUY7 163 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 PRDM7Q9NQW5 492 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 PNO1Q9NRX1 252 aaKnown RBP11.25□□□□□ -0.61
DDX54-206ENST00000549271 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms