RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 STOX2Q9P2F5 926 aaPredicted RBP21.99■■□□□ 1.11
NPAS3-206ENST00000548645 KCNN3Q9UGI6 736 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 PITPNM1O00562 1244 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 UQCRC1P31930 480 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 TUFMP49411 452 aaKnown RBP21.99■■□□□ 1.11
NPAS3-206ENST00000548645 RPS25P62851 125 aaKnown RBP21.99■■□□□ 1.11
NPAS3-206ENST00000548645 MC1RQ01726 317 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 ZDHHC20Q5W0Z9 365 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 APOBEC4Q8WW27 367 aaKnown RBP21.99■■□□□ 1.11
NPAS3-206ENST00000548645 HYLS1Q96M11 299 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 YARS2Q9Y2Z4 477 aaKnown RBP21.99■■□□□ 1.11
NPAS3-206ENST00000548645 ACADMP11310 421 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 ARSBP15848 533 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 PTBP1P26599 531 aaKnown RBP eCLIP21.98■■□□□ 1.11
NPAS3-206ENST00000548645 MPEG1Q2M385 716 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 MFSD14CQ5VZR4 134 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 MED27Q6P2C8 311 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 OTOP2Q7RTS6 562 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 UPRTQ96BW1 309 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 HDHD5Q9BXW7 423 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 POLDIP3Q9BY77 421 aaKnown RBP21.98■■□□□ 1.11
NPAS3-206ENST00000548645 SYNDIG1Q9H7V2 258 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 MARCH5Q9NX47 278 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 TMEM161AQ9NX61 479 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 WASHC1A8K0Z3 465 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 C5orf58C9J3I9 102 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 H1F0P07305 194 aaKnown RBP21.98■■□□□ 1.11
NPAS3-206ENST00000548645 INPP1P49441 399 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 SF3A2Q15428 464 aaKnown RBP21.98■■□□□ 1.11
NPAS3-206ENST00000548645 C3orf38Q5JPI3 329 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 IDO2Q6ZQW0 420 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 QSOX2Q6ZRP7 698 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 COMMD6Q7Z4G1 85 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 HS6ST3Q8IZP7 471 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 SYT14Q8NB59 555 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 TMEM145Q8NBT3 493 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 TESQ9UGI8 421 aaKnown RBP21.98■■□□□ 1.11
NPAS3-206ENST00000548645 SPEF1Q9Y4P9 236 aa21.98■■□□□ 1.11
NPAS3-206ENST00000548645 A0A1W2PRB8 838 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 LEUTXA8MZ59 168 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 ZNF197O14709 1029 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 GBAP04062 536 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 IFI30P13284 250 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 TNNI3P19429 210 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 TPBGQ13641 420 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 IL18Q14116 193 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 TRIM71Q2Q1W2 868 aaKnown RBP21.97■■□□□ 1.11
NPAS3-206ENST00000548645 FLYWCH1Q4VC44 716 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 KLHL22Q53GT1 634 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 PRSS55Q6UWB4 352 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-206ENST00000548645 MALT1Q9UDY8 824 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 ASGR1P07306 291 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 HMGA1P17096 107 aaKnown RBP21.97■■□□□ 1.11
NPAS3-206ENST00000548645 LHCGRP22888 699 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 PNLIPRP1P54315 467 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 SLC25A30Q5SVS4 291 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 PGBD2Q6P3X8 592 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 UNC5DQ6UXZ4 953 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 PLA2G15Q8NCC3 412 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 AP2M1Q96CW1 435 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 MTERF3Q96E29 417 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 TMEM43Q9BTV4 400 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 PHF11Q9UIL8 331 aa21.97■■□□□ 1.11
NPAS3-206ENST00000548645 SMLR1H3BR10 107 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 PRKYO43930 277 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 PSIP1O75475 530 aaKnown RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 DGKGP49619 791 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 ABATP80404 500 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 SMAD3P84022 425 aaKnown RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 ANGPT1Q15389 498 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 SYT14P1Q58G82 188 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 TCTN3Q6NUS6 607 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 CELF5Q8N6W0 485 aaKnown RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 OR2AP1Q8NGE2 309 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 DNAJA4Q8WW22 397 aaPredicted RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 AKAP1Q92667 903 aaKnown RBP eCLIP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 UFD1Q92890 307 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 ISYNA1Q9NPH2 558 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 FAM8A1Q9UBU6 413 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 SF3B6Q9Y3B4 125 aaKnown RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 CASKO14936 926 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 MTX2O75431 263 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 SLCO2B1O94956 709 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 ELAVL2Q12926 359 aaKnown RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 P2RY14Q15391 338 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 CCNJQ5T5M9 372 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 KLHDC8AQ8IYD2 350 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 IQCF1Q8N6M8 205 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 C16orf78Q8WTQ4 265 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 TM9SF4Q92544 642 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 MARVELD3Q96A59 401 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 PDXPQ96GD0 296 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 GFM1Q96RP9 751 aaKnown RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 KCNE2Q9Y6J6 123 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 CCDC88CQ9P219 2028 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 HPGDSO60760 199 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 LATS1O95835 1130 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 FGF9P31371 208 aaPredicted RBP21.96■■□□□ 1.11
NPAS3-206ENST00000548645 CAV3P56539 151 aa21.96■■□□□ 1.11
NPAS3-206ENST00000548645 LRR1Q96L50 414 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms