RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ACSM2BQ68CK6 577 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 RPUSD3Q6P087 351 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 ZCCHC23Q6ZST2 131 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 TRIM46Q7Z4K8 759 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 MMP21Q8N119 569 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 SUN3Q8TAQ9 357 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 DOK4Q8TEW6 326 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 ZNF721Q8TF20 911 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 C11orf24Q96F05 449 aaPredicted RBP17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 SIGLEC12Q96PQ1 595 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 PELOQ9BRX2 385 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 NTNG1Q9Y2I2 539 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 SHANK1Q9Y566 2161 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 C1orf226A1L170 272 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 TMEM200CA6NKL6 621 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 AZIN1O14977 448 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 PCDH7O60245 1069 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 OR10H2O60403 315 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 PRAMEF2O60811 474 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 SLC35E2P0CK97 266 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 PIK3R1P27986 724 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 OC90Q02509 493 aaPredicted RBP17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 OR1C1Q15619 314 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 IMPG1Q17R60 797 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 SPDYAQ5MJ70 313 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 SLC48A1Q6P1K1 146 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 GALNT18Q6P9A2 607 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 HSDL2Q6YN16 418 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 MDS2Q8NDY4 140 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 OR4K14Q8NGD5 310 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 SREK1Q8WXA9 508 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 SENP5Q96HI0 755 aaPredicted RBP17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 LIN28AQ9H9Z2 209 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 CES1P1Q9UKY3 287 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 FIS1Q9Y3D6 152 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 ACTL7BQ9Y614 415 aa17.42■□□□□ 0.38
PRPF40B-206ENST00000547764 BAHCC1Q9P281 2608 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 GNG14A0A1W2PPG7 69 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 HRKO00198 91 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 CDK2AP1O14519 115 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 FCHO1O14526 889 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 DYRK3O43781 588 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 VPS4BO75351 444 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 IGKV3-11P04433 115 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 MYZAPP0CAP1 466 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 TIA1P31483 386 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 SERPINB4P48594 390 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 XKP51811 444 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 KCNC4Q03721 635 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 KANK2Q63ZY3 851 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 SPINK14Q6IE38 97 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 C16orf47Q6ZP98 133 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 ATCAYQ86WG3 371 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 OR6Y1Q8NGX8 325 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 RIT1Q92963 219 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 BARD1Q99728 777 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 FAIM2Q9BWQ8 316 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 EBPLQ9BY08 206 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 EML4Q9HC35 981 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 RRAGDQ9NQL2 400 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 SIRT5Q9NXA8 310 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 COPS7AQ9UBW8 275 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 VPS4AQ9UN37 437 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 DLGAP4Q9Y2H0 992 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 CCL27Q9Y4X3 112 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 PTGDR2Q9Y5Y4 395 aa17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 RP1L1Q8IWN7 2480 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-206ENST00000547764 ITGA10O75578 1167 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 RSL1D1O76021 490 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 NEURL1O76050 574 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 FGF4P08620 206 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 IL3P08700 152 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ARRB2P32121 409 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 GALNSP34059 522 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 TRHRP34981 398 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 SERPINB5P36952 375 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ALDH9A1P49189 494 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 CYB561P49447 251 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ERVK-8P63133 956 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 RNF4P78317 190 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 MPP2Q14168 576 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ZNF267Q14586 743 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 SPRED3Q2MJR0 410 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ZNF750Q32MQ0 723 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ZNF766Q5HY98 468 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 NUDCD3Q8IVD9 361 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 GALNT11Q8NCW6 608 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 OR8K3Q8NH51 312 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 GRHL3Q8TE85 626 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 C16orf78Q8WTQ4 265 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 FBXL20Q96IG2 436 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 PKNOX2Q96KN3 472 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 ART5Q96L15 291 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 CNPPD1Q9BV87 410 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 TUBB1Q9H4B7 451 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 TRIM45Q9H8W5 580 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 KCNK9Q9NPC2 374 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 LRFN1Q9P244 771 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 MYOTQ9UBF9 498 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 HEY2Q9UBP5 337 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms