RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CPMP14384 443 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 CPA2P48052 419 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 NCBP2P52298 156 aaKnown RBP eCLIP14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 IGLV3-21P80748 117 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 PLIN5Q00G26 463 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 SLC2A7Q6PXP3 512 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 C16orf89Q6UX73 402 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 ARPINQ7Z6K5 226 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 SCUBE1Q8IWY4 988 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 OR4A15Q8NGL6 344 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 GOT1L1Q8NHS2 421 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 NUDT8Q8WV74 236 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 CIDECQ96AQ7 238 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 CNRIP1Q96F85 164 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 ZNF681Q96N22 645 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 PTCHD1Q96NR3 888 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 NPAS2Q99743 824 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 HOPXQ9BPY8 73 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 RBCK1Q9BYM8 510 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 SPRY4Q9C004 299 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 SEMA3GQ9NS98 782 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 SLC22A11Q9NSA0 550 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 CTSFQ9UBX1 484 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 VPS4AQ9UN37 437 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 PADI2Q9Y2J8 665 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 NUP210LQ5VU65 1888 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 FER1L5A0AVI2 2057 aa14.88□□□□□ -0.03
TRAFD1-203ENST00000547063 ASPDHA6ND91 283 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 VSTM2BA6NLU5 285 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 STMND1H3BQB6 276 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 PCDH17O14917 1159 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 LDB3O75112 727 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 CDC123O75794 336 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 DXOO77932 396 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 ATP1B1P05026 303 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 IFI6P09912 130 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 CD1EP15812 388 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 PTPN4P29074 926 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 GALNSP34059 522 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 GPC1P35052 558 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 FEN1P39748 380 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 COL9A2Q14055 689 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 NKG7Q16617 165 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 MPEG1Q2M385 716 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 DNAL1Q4LDG9 190 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 VWA2Q5GFL6 755 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 PAGE3Q5JUK9 113 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 LRIF1Q5T3J3 769 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 C6orf163Q5TEZ5 329 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 MLIPQ5VWP3 458 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 MRPL14Q6P1L8 145 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 DHDDSQ86SQ9 333 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 RETREG3Q86VR2 466 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 ANKRD46Q86W74 232 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 ST13P4Q8IZP2 240 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 TMEM52Q8NDY8 209 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 PLPP5Q8NEB5 264 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 UCN3Q969E3 161 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 ANKRD9Q96BM1 317 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 RBM18Q96H35 190 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 AMDHD1Q96NU7 426 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 SH3GL1Q99961 368 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 CHST8Q9H2A9 424 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 SERHLQ9NQF3 203 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 MAP10Q9P2G4 905 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 CROTQ9UKG9 612 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 MKL2Q9ULH7 1088 aa14.87□□□□□ -0.03
TRAFD1-203ENST00000547063 PMS2P1A4D2B8 440 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 GYG2O15488 501 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 DYRK3O43781 588 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 OR10H2O60403 315 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 CPSF4O95639 269 aaKnown RBP14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 C6orf47O95873 294 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 HEXBP07686 556 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 RAB40ALP0C0E4 278 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 C8orf89P0DMQ9 161 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 PPIBP23284 216 aaKnown RBP14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 SLC5A2P31639 672 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 PLA2G5P39877 138 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 ERV3-1Q14264 604 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 NCF4Q15080 339 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 PRSS53Q2L4Q9 553 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 CPZQ66K79 652 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 BHLHB9Q6PI77 547 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 OR4N5Q8IXE1 308 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 CCDC116Q8IYX3 515 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 CLECL1Q8IZS7 167 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 NLGN4XQ8N0W4 816 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 NLGN4YQ8NFZ3 816 aaPredicted RBP14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 PSMA8Q8TAA3 256 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 METTL21AQ8WXB1 218 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 MOAP1Q96BY2 351 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 LRRC58Q96CX6 371 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 DGAT2Q96PD7 388 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 PHF12Q96QT6 1004 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 ALOXE3Q9BYJ1 711 aa14.86□□□□□ -0.03
TRAFD1-203ENST00000547063 GLIPR2Q9H4G4 154 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms