RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 NCF1CA8MVU1 366 aaPredicted RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 RTCAO00442 366 aaKnown RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 TRIM3O75382 744 aaPredicted RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 C1QAP02745 245 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 COX7A2P14406 83 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 NCF1P14598 390 aaPredicted RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 TACR1P25103 407 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 HOXC12P31275 282 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 HSPA7P48741 367 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 WNT3P56703 355 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 BIKQ13323 160 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 LAPTM5Q13571 262 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 PDK4Q16654 411 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 FBXO48Q5FWF7 155 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 MAATS1Q7Z4T9 603 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 LACC1Q8IV20 430 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 LRRC8AQ8IWT6 810 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 PDPRQ8NCN5 879 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 WFDC11Q8NEX6 87 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 ESAMQ96AP7 390 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 LRRC46Q96FV0 321 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 PRDM14Q9GZV8 571 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 DDX47Q9H0S4 455 aaKnown RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 CNOT10Q9H9A5 744 aaKnown RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 WWOXQ9NZC7 414 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 MTRF1LQ9UGC7 380 aaKnown RBP15.31■□□□□ 0.04
CPSF7-225ENST00000545934 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 SPACA6W5XKT8 324 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 MED12LQ86YW9 2145 aa15.31■□□□□ 0.04
CPSF7-225ENST00000545934 ANKRD33BA6NCL7 494 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 CES2O00748 559 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 STK16O75716 305 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 EPXP11678 715 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 CPN2P22792 545 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 TRPC1P48995 793 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 ZNF136P52737 540 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 LTBQ06643 244 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 DUSP8Q13202 625 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 NTRK2Q16620 822 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 TMEM35AQ53FP2 167 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 SULT1C3Q6IMI6 304 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 OR4N5Q8IXE1 308 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 LAS2Q8IYD9 372 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 PPWD1Q96BP3 646 aaKnown RBP15.3■□□□□ 0.04
CPSF7-225ENST00000545934 ART5Q96L15 291 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 DGAT2Q96PD7 388 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 TIMP4Q99727 224 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 UBQLN3Q9H347 655 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 RHOJQ9H4E5 214 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 JKAMPQ9P055 326 aa15.3■□□□□ 0.04
CPSF7-225ENST00000545934 PTBP2Q9UKA9 531 aaKnown RBP15.3■□□□□ 0.04
CPSF7-225ENST00000545934 A0A1B0GTL3 188 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 TP73O15350 636 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 GOSR1O95249 250 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 CLPSP04118 112 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 CD1DP15813 335 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 SERPINB3P29508 390 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 MSH2P43246 934 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 PCDH1Q08174 1060 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 CBLBQ13191 982 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 EBPQ15125 230 aaKnown RBP15.29■□□□□ 0.04
CPSF7-225ENST00000545934 OR4D1Q15615 310 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 SPRED3Q2MJR0 410 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 NHSL2Q5HYW2 709 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 PAGE2BQ5JRK9 111 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 LIX1Q8N485 282 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 SNX31Q8N9S9 440 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 NTNG2Q96CW9 530 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 VPS39Q96JC1 886 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 C18orf12Q96KH6 178 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 SMR3AQ99954 134 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 WWTR1Q9GZV5 400 aa15.29■□□□□ 0.04
CPSF7-225ENST00000545934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.29■□□□□ 0.04
CPSF7-225ENST00000545934 C15orf38-AP3S2A0A0A6YYH1 394 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 HPNP05981 417 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 SLC37A1P57057 533 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 SORDQ00796 357 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 PLIN5Q00G26 463 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 TNFRSF17Q02223 184 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 CHIT1Q13231 466 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 HIST2H2ACQ16777 129 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-225ENST00000545934 AP5B1Q2VPB7 878 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 TBCELQ5QJ74 424 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 DEPDC1Q5TB30 811 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 FNDC7Q5VTL7 733 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 KHDRBS2Q5VWX1 349 aaKnown RBP15.28■□□□□ 0.04
CPSF7-225ENST00000545934 NSUN5P2Q63ZY6 315 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 VASNQ6EMK4 673 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 HIST2H2AA3Q6FI13 130 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 GPSM1Q86YR5 675 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 ANKMY2Q8IV38 441 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 ST13P4Q8IZP2 240 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-225ENST00000545934 SPATA6LQ8N4H0 392 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 ZNF441Q8N8Z8 693 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 FAM13CQ8NE31 585 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 TANKQ92844 425 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 RBM18Q96H35 190 aaKnown RBP15.28■□□□□ 0.04
CPSF7-225ENST00000545934 DOHHQ9BU89 302 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 PHACTR1Q9C0D0 580 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 RPF2Q9H7B2 306 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms