RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 CCDC115Q96NT0 180 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 LPAR4Q99677 370 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF559Q9BR84 538 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 TWSG1Q9GZX9 223 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 RHCGQ9UBD6 479 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 LAMP5Q9UJQ1 280 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 TBX21Q9UL17 535 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 TRBV11-1A0A0K0K1C0 115 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 CDC14CA4D256 554 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 M0QX08 132 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 EIF3FO00303 357 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 AURKAO14965 403 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 CH25HO95992 272 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 CXCL10P02778 98 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 SLC35E2BP0CK96 405 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 PGGT1BP53609 377 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 EMP2P54851 167 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 TAS2R38P59533 333 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 CTBSQ01459 385 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 SERTAD2Q14140 314 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 ATG9BQ674R7 924 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 TMEM135Q86UB9 458 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 LAPTM4BQ86VI4 370 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 SLC5A8Q8N695 610 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 OR6C1Q96RD1 312 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 MCHR1Q99705 422 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 THAP10Q9P2Z0 257 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 GNG8Q9UK08 70 aa8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 RPL36Q9Y3U8 105 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-202ENST00000545908 SH3PXD2BA1X283 911 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 VSTM2BA6NLU5 285 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 GPR37L1O60883 481 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PRKD3O94806 890 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 CHRM5P08912 532 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF140P52738 457 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 NR1H2P55055 460 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 SIM1P81133 766 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 GALK2Q01415 458 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 TRAM2Q15035 370 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ADNP2Q6IQ32 1131 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PPP1R3BQ86XI6 285 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF440Q8IYI8 595 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 NAXEQ8NCW5 288 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF222Q9UK12 451 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 SRPK3Q9UPE1 567 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PCDHB14Q9Y5E9 798 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PTGDR2Q9Y5Y4 395 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PRSS21Q9Y6M0 314 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 DLEC1Q9Y238 1755 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 C17orf105B2RV13 164 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 FGF3P11487 239 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 GPR143P51810 404 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 SGCAQ16586 387 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ARHGAP12Q8IWW6 846 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF676Q8N7Q3 588 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 BRF2Q9HAW0 419 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 CUEDC1Q9NWM3 386 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 HAT1O14929 419 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 RFPL1O75677 317 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PTPN6P29350 595 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 QPRTQ15274 297 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 HMGN2P46Q86SG4 172 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 RELL1Q8IUW5 271 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 CCDC54Q8NEL0 328 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 RFT1Q96AA3 541 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ALOXE3Q9BYJ1 711 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 COQ10BQ9H8M1 238 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 KCNK12Q9HB15 430 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 IGSF5Q9NSI5 407 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 RSL24D1Q9UHA3 163 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 CITO14578 2027 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PPM1BO75688 479 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PSMA1P25786 263 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PDHA2P29803 388 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 PRLHRP49683 370 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF846Q147U1 533 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 C4orf46Q504U0 113 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 TPRG1LQ5T0D9 272 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 IER5LQ5T953 404 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 OR2T5Q6IEZ7 315 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 RBM44Q6ZP01 1051 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 FAM86B1Q8N7N1 296 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 OR2A12Q8NGT7 310 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 OR2T29Q8NH02 315 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 MNTQ99583 582 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 FKBP7Q9Y680 259 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 NFS1Q9Y697 457 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 RDH16O75452 317 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 C1orf105O95561 183 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 SRFP11831 508 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ACSL1P33121 698 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 SLC18A1P54219 525 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 SF3B4Q15427 424 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■■■□□ 19.1
MTHFD1-202ENST00000545908 FBXO42Q6P3S6 717 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 OR52P1PQ8NH57 321 aa8.63□□□□□ -1.03
MTHFD1-202ENST00000545908 ZNF778Q96MU6 729 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms