RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CUTCQ9NTM9 273 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 TERF2IPQ9NYB0 399 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 NARFQ9UHQ1 456 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 RUVBL2Q9Y230 463 aaKnown RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 NCKAP1Q9Y2A7 1128 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 KLK4Q9Y5K2 254 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 FER1L6Q2WGJ9 1857 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 MUC3AQ02505 3323 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 COL5A3P25940 1745 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 DLEC1Q9Y238 1755 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 SCN4AP35499 1836 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 DICER1Q9UPY3 1922 aaKnown RBP3.35□□□□□ -1.87
SNHG1-224ENST00000545688 CASP8AP2Q9UKL3 1982 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 LOC390937A0A1W2PQ73 354 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 IGLON5A6NGN9 336 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 ANHXE9PGG2 379 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 PGRMC2O15173 223 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 KRT6AP02538 564 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 KRT6BP04259 564 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 EPHX2P34913 555 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-224ENST00000545688 KRT6CP48668 564 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 RPL34P49207 117 aaKnown RBP3.35□□□□□ -1.87
SNHG1-224ENST00000545688 ZNF79Q15937 498 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 MARC1Q5VT66 337 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 TCEAL6Q6IPX3 200 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 OR6T1Q8NGN1 323 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 MRPS27Q92552 414 aaKnown RBP3.35□□□□□ -1.87
SNHG1-224ENST00000545688 TESK2Q96S53 571 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 PINK1Q9BXM7 581 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 ANKRD2Q9GZV1 360 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 DPEP2Q9H4A9 486 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 PLEKHA3Q9HB20 300 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 RAB9BQ9NP90 201 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 DHRS4-AS1Q9P1J3 65 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 UBQLN2Q9UHD9 624 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 MRPL11Q9Y3B7 192 aaKnown RBP3.35□□□□□ -1.87
SNHG1-224ENST00000545688 LIPGQ9Y5X9 500 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 TIAM2Q8IVF5 1701 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 UNC80Q8N2C7 3258 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 FLT4P35916 1363 aa3.35□□□□□ -1.87
SNHG1-224ENST00000545688 TRIOBPQ9H2D6 2365 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 FAM220BPB1ANY3 271 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 KBTBD11O94819 623 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 GGPS1O95749 300 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 SPP1P10451 314 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 UMPSP11172 480 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 ERCC2P18074 760 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 PSMA3P25788 255 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 RPL9P32969 192 aaKnown RBP3.34□□□□□ -1.87
SNHG1-224ENST00000545688 OR3A3P47888 321 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 GMPSP49915 693 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-224ENST00000545688 PEX3P56589 373 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 MAPK11Q15759 364 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 CCL14Q16627 93 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 SLC22A6Q4U2R8 563 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.34□□□□□ -1.87
SNHG1-224ENST00000545688 PRR5LQ6MZQ0 368 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 TMEM64Q6YI46 380 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 FLVCR1-AS1Q8TAF5 88 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 CD99L2Q8TCZ2 262 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 RCHY1Q96PM5 261 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 RANBP9Q96S59 729 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 SLC25A23Q9BV35 468 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 LIME1Q9H400 295 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 ST6GALNAC4Q9H4F1 302 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 SP140LQ9H930 580 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 MRGBPQ9NV56 204 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 C5AR2Q9P296 337 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 MGAT4AQ9UM21 535 aa3.34□□□□□ -1.87
SNHG1-224ENST00000545688 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 CCDC88AQ3V6T2 1871 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 TEX48A0A1B0GUV7 120 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 FBP2O00757 339 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 UBE2CO00762 179 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 SUPT20HL2P0C7V6 817 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 SPRP35270 261 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 HLCSP50747 726 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 CALD1Q05682 793 aaKnown RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 LTB4RQ15722 352 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 KYNUQ16719 465 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 USP50Q70EL3 339 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 AK8Q96MA6 479 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 FAM129AQ9BZQ8 928 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 TMX4Q9H1E5 349 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 NIP7Q9Y221 180 aaKnown RBP eCLIP3.33□□□□□ -1.884e-44■■■■■ 26.8
SNHG1-224ENST00000545688 SLC6A5Q9Y345 797 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 CPQQ9Y646 472 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 SPTBN5Q9NRC6 3674 aaKnown RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 COL4A5P29400 1685 aa3.33□□□□□ -1.88
SNHG1-224ENST00000545688 AFDNP55196 1824 aaKnown RBP3.33□□□□□ -1.88
SNHG1-224ENST00000545688 HSP90AB1P08238 724 aaKnown RBP3.32□□□□□ -1.88
SNHG1-224ENST00000545688 ATP6V1B1P15313 513 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 EPS15P42566 896 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 BACE1P56817 501 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 CNTN1Q12860 1018 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 TNK1Q13470 666 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 COG2Q14746 738 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms