RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 REXO4Q9GZR2 422 aaKnown RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 RHBGQ9H310 441 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 CDC42EP4Q9H3Q1 356 aaKnown RBP7.19□□□□□ -1.26
SNHG1-223ENST00000545440 KLHL31Q9H511 634 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 SNX15Q9NRS6 342 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ABI3Q9P2A4 366 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ACOT9Q9Y305 439 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 MMACHCQ9Y4U1 282 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ASB1Q9Y576 335 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 FREM3P0C091 2139 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 ZNF407Q9C0G0 2248 aa7.19□□□□□ -1.26
SNHG1-223ENST00000545440 PHF3Q92576 2039 aaKnown RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 A0A096LPK6 155 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 C7orf72A4D263 438 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 OR2W5A6NFC9 320 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SAGE2PA6NJ88 616 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 K7EPI3 171 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 UBXN8O00124 270 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 B3GALT2O43825 422 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KLK8O60259 260 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 UGDHO60701 494 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 B4GALT2O60909 372 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SCELO95171 688 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KLHL2O95198 593 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ACSL3O95573 720 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 WDPCPO95876 746 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 TBX6O95947 436 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 C2P06681 752 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 INHBAP08476 426 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MYBL2P10244 700 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MTHFD2P13995 350 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MAOAP21397 527 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 CASP2P42575 452 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MAGEA12P43365 314 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KCNC1P48547 511 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MASP1P48740 699 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ALDH18A1P54886 795 aaKnown RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MTTPP55157 894 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 HSD17B7P56937 341 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 RAB38P57729 211 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 OR4D2P58180 307 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SLC26A5P58743 744 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 TAS2R50P59544 299 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 IRF9Q00978 393 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 IRF8Q02556 426 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 CHIT1Q13231 466 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 BMPR2Q13873 1038 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 DOC2AQ14183 400 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 RCN2Q14257 317 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ACAP2Q15057 778 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 UAP1Q16222 522 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 HIST2H2ACQ16777 129 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MEP1AQ16819 746 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 TM4SF20Q53R12 229 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 FBXO48Q5FWF7 155 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MROH9Q5TGP6 573 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 HIST2H2AA3Q6FI13 130 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ADNP2Q6IQ32 1131 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 METTL2BQ6P1Q9 378 aaKnown RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 TAOK1Q7L7X3 1001 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 LAS2Q8IYD9 372 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 BEST3Q8N1M1 668 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 BCORP1Q8N888 145 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 CATSPER1Q8NEC5 780 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SRFBP1Q8NEF9 429 aaKnown RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 NUP43Q8NFH3 380 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 OR1N1Q8NGS0 311 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KIF18AQ8NI77 898 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SUN3Q8TAQ9 357 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ELP5Q8TE02 316 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SSC4DQ8WTU2 575 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KCTD4Q8WVF5 259 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SLC44A1Q8WWI5 657 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ESAMQ96AP7 390 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 NXNL1Q96CM4 212 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 QRFPRQ96P65 431 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KCNC2Q96PR1 638 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 SERINC2Q96SA4 455 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MS4A8Q9BY19 250 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ROGDIQ9GZN7 287 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 COPS7BQ9H9Q2 264 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 KCNK13Q9HB14 408 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 OLAHQ9NV23 265 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 PLA2G3Q9NZ20 509 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 OPTCQ9UBM4 332 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MAPRE3Q9UPY8 281 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 MRPS33Q9Y291 106 aaKnown RBP7.18□□□□□ -1.26
SNHG1-223ENST00000545440 TSC22D4Q9Y3Q8 395 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 PCDHGB6Q9Y5F9 930 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 ARHGAP21Q5T5U3 1957 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 CACNA1DQ01668 2161 aa7.18□□□□□ -1.26
SNHG1-223ENST00000545440 NCKAP5O14513 1909 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 NINQ8N4C6 2090 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 CLDN4O14493 209 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 PRAMEF2O60811 474 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 DNAJB6O75190 326 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 SEMA7AO75326 666 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 KRT38O76015 456 aa7.17□□□□□ -1.26
SNHG1-223ENST00000545440 DDAH2O95865 285 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms