RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 C9orf106Q8NAJ2 232 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 SREK1Q8WXA9 508 aaKnown RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 WDR34Q96EX3 536 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 ZFP3Q96NJ6 502 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 SECISBP2Q96T21 854 aaKnown RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 BAG1Q99933 345 aaPredicted RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 RBM24Q9BX46 236 aaKnown RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 UGT2B28Q9BY64 529 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 VWA7Q9Y334 891 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 PABPN1LA6NDY0 278 aaKnown RBP13.46□□□□□ -0.25
RTN3-214ENST00000545432 A8MXE2 369 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 SIAH2O43255 324 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 RCBTB2O95199 551 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 SNX4O95219 450 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 CPN1P15169 458 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 BMP7P18075 431 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 PGGT1BP53609 377 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 FOXF2Q12947 444 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.25
RTN3-214ENST00000545432 E2F2Q14209 437 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 SLBPQ14493 270 aaKnown RBP eCLIP13.46□□□□□ -0.25
RTN3-214ENST00000545432 POU4F3Q15319 338 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 ACKR1Q16570 336 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 ZNF793Q6ZN11 406 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 KRT78Q8N1N4 520 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 ZNF441Q8N8Z8 693 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 BBOF1Q8ND07 529 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 FBXL20Q96IG2 436 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 MAPKAP1Q9BPZ7 522 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 DESI2Q9BSY9 194 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 DOHHQ9BU89 302 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 CAPS2Q9BXY5 557 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 ANGPTL4Q9BY76 406 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 GSX2Q9BZM3 304 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 ROGDIQ9GZN7 287 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 GALNT8Q9NY28 637 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 GPRC5BQ9NZH0 403 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
RTN3-214ENST00000545432 TESMINQ9Y4I5 508 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 OARD1Q9Y530 152 aa13.46□□□□□ -0.25
RTN3-214ENST00000545432 TRIM64A6NGJ6 449 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 ANKDD1BA6NHY2 528 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 TRIM64BA6NI03 449 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 EEF1E1-BLOC1S5C9J1V9 151 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 EEF1E1O43324 174 aaKnown RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 FGF17O60258 216 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 ACSL3O95573 720 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 KRT14P02533 472 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 TMIGD3P0DMS9 266 aaPredicted RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 FPR1P21462 350 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 ATP5A1P25705 553 aaKnown RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 GDF1P27539 372 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 GGT5P36269 586 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 SLCO1A2P46721 670 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 KCNC1P48547 511 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 KRTAP1-1Q07627 177 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 CRYMQ14894 314 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 DGAT2L6Q6ZPD8 337 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 SRFBP1Q8NEF9 429 aaKnown RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 GABPB2Q8TAK5 448 aaPredicted RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 ART5Q96L15 291 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 MARK4Q96L34 752 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 ZNF597Q96LX8 424 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 RUNDC3BQ96NL0 473 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 TBCDQ9BTW9 1192 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 PLAC1Q9HBJ0 212 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 EIF3LQ9Y262 564 aaKnown RBP13.45□□□□□ -0.26
RTN3-214ENST00000545432 MXRA5Q9NR99 2828 aa13.45□□□□□ -0.26
RTN3-214ENST00000545432 GOLGA8MH3BSY2 632 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 HRKO00198 91 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 CASKO14936 926 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 SMAD7O15105 426 aaKnown RBP13.44□□□□□ -0.26
RTN3-214ENST00000545432 TTC4O95801 387 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 COX7A2P14406 83 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 ZNF37AP17032 561 aaPredicted RBP13.44□□□□□ -0.26
RTN3-214ENST00000545432 PGAM1P18669 254 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 SOX18P35713 384 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 MC3RP41968 323 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 GDF5P43026 501 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 VPS41P49754 854 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 ZNF75DP51815 510 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 TERF1P54274 439 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 SLC37A1P57057 533 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 EEF1A1P68104 462 aaKnown RBP13.44□□□□□ -0.26
RTN3-214ENST00000545432 CAPRIN1Q14444 709 aaKnown RBP13.44□□□□□ -0.26
RTN3-214ENST00000545432 EBPQ15125 230 aaKnown RBP13.44□□□□□ -0.26
RTN3-214ENST00000545432 SPRED3Q2MJR0 410 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 DCST1Q5T197 706 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 TEDDM1Q5T9Z0 273 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 EEF1A1P5Q5VTE0 462 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 ADNP2Q6IQ32 1131 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 TTC27Q6P3X3 843 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms