RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ANKRD9Q96BM1 317 aaPredicted RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 INTS12Q96CB8 462 aaKnown RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 NTNG2Q96CW9 530 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 MARK4Q96L34 752 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 ZNF597Q96LX8 424 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 GNRHR2Q96P88 292 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 SERINC2Q96SA4 455 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 SECISBP2Q96T21 854 aaKnown RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 TUBA1CQ9BQE3 449 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 SFXN3Q9BWM7 321 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 C20orf96Q9NUD7 363 aaPredicted RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 KLHL28Q9NXS3 571 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 COPS7AQ9UBW8 275 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 NDRG3Q9UGV2 375 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 DYRK1BQ9Y463 629 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.57□□□□□ -1.042e-6■■■■■ 31
CHD4-212ENST00000545083 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 RNF223E7ERA6 249 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 SNPHO15079 494 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 WIPF1O43516 503 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 FGF17O60258 216 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 TNFSF13O75888 250 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 RCBTB2O95199 551 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 IFNA2P01563 188 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 PAX1P15863 534 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 CRYGSP22914 178 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 CCKARP32238 428 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 CPOXP36551 454 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 MC3RP41968 323 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 KCNJ1P48048 391 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 MTTPP55157 894 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 TBL3Q12788 808 aaKnown RBP8.56□□□□□ -1.04
CHD4-212ENST00000545083 SERTAD2Q14140 314 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 SLBPQ14493 270 aaKnown RBP eCLIP8.56□□□□□ -1.04
CHD4-212ENST00000545083 EFTUD2Q15029 972 aaKnown RBP eCLIP8.56□□□□□ -1.04
CHD4-212ENST00000545083 NTRK2Q16620 822 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 C18orf21Q32NC0 220 aaPredicted RBP8.56□□□□□ -1.04
CHD4-212ENST00000545083 SBSNQ6UWP8 590 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 ZNF793Q6ZN11 406 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 SLCO4C1Q6ZQN7 724 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 C22orf34Q6ZV56 151 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 ADGRE4PQ86SQ3 457 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 KIAA1328Q86T90 577 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 HIPK1Q86Z02 1210 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 OR4N5Q8IXE1 308 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 SYCE1Q8N0S2 351 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 SLC15A4Q8N697 577 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 ZNF441Q8N8Z8 693 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 OR2L5Q8NG80 312 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 GABPB2Q8TAK5 448 aaPredicted RBP8.56□□□□□ -1.04
CHD4-212ENST00000545083 ZPLD1Q8TCW7 415 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 ATL1Q8WXF7 558 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 DIO2Q92813 273 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 ABTB1Q969K4 478 aaPredicted RBP8.56□□□□□ -1.04
CHD4-212ENST00000545083 PPWD1Q96BP3 646 aaKnown RBP8.56□□□□□ -1.04
CHD4-212ENST00000545083 GAL3ST4Q96RP7 486 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 MAPKAP1Q9BPZ7 522 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 G6PC3Q9BUM1 346 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 REXO4Q9GZR2 422 aaKnown RBP8.56□□□□□ -1.04
CHD4-212ENST00000545083 PRDM7Q9NQW5 492 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 TAS2R13Q9NYV9 303 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 C15orf41Q9Y2V0 281 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 IKBKGQ9Y6K9 419 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 CAPN6Q9Y6Q1 641 aa8.56□□□□□ -1.04
CHD4-212ENST00000545083 A0A088AWK7 358 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 ANKRD33BA6NCL7 494 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 C1GALT1C1LP0DN25 315 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 ZNF10P21506 573 aaPredicted RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 SERPINB3P29508 390 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 MSH2P43246 934 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 MAGEA6P43360 314 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 STT3AP46977 705 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 VPS41P49754 854 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 FBXW4P57775 412 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 IGLV3-21P80748 117 aaPredicted RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 RCAN2Q14206 197 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 TRIP13Q15645 432 aaPredicted RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 CCNG2Q16589 344 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 PPP1R3AQ16821 1122 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 TRIM40Q6P9F5 258 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 DRICH1Q6PGQ1 229 aaPredicted RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 TMIGD1Q6UXZ0 262 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 UBE3DQ7Z6J8 389 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 YRDCQ86U90 279 aaKnown RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 LMNTD2Q8IXW0 634 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 RILPQ96NA2 401 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 F2RL3Q96RI0 385 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 TRIM54Q9BYV2 358 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 WWTR1Q9GZV5 400 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 IARS2Q9NSE4 1012 aaKnown RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 ZNF701Q9NV72 531 aaPredicted RBP8.55□□□□□ -1.04
CHD4-212ENST00000545083 CLCF1Q9UBD9 225 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 PACSIN3Q9UKS6 424 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 MAD1L1Q9Y6D9 718 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 KCNE2Q9Y6J6 123 aa8.55□□□□□ -1.04
CHD4-212ENST00000545083 HEATR5AQ86XA9 2040 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 MED12LQ86YW9 2145 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 SVEP1Q4LDE5 3571 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms