RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 REXO5Q96IC2 774 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 EDEM2Q9BV94 578 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 KAT8Q9H7Z6 458 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SLAMF7Q9NQ25 335 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SLC6A13Q9NSD5 602 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 STARD5Q9NSY2 213 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 FAM120CQ9NX05 1096 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 TOR4AQ9NXH8 423 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 VAPAQ9P0L0 249 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SLAMF8Q9P0V8 285 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 KLHL3Q9UH77 587 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 RAB23Q9ULC3 237 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 OAZ3Q9UMX2 235 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 GMEB1Q9Y692 573 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SCN3AQ9NY46 2000 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 NUP214P35658 2090 aaPredicted RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 TRBV5-3A0A0A0MS03 114 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 IGHV5-10-1A0A0J9YXX1 117 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SAC3D1A6NKF1 404 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 WASHC1A8K0Z3 465 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 D6RAR5 112 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SCAMP2O15127 329 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 FOXS1O43638 330 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 LRP3O75074 770 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 PRKRAO75569 313 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ZBTB11O95625 1053 aaPredicted RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 CPNE6O95741 557 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 IL3P08700 152 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 FURINP09958 794 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 LAMP1P11279 417 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 FOLR1P15328 257 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 NELFEP18615 380 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 HIST1H1TP22492 207 aaPredicted RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 CERS1P27544 350 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 GRK3P35626 688 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 KIR3DL1P43629 444 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ALDH3B2P48448 385 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ARHGDIAP52565 204 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 PLA2G16P53816 162 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 OR4D2P58180 307 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 VSX2P58304 361 aaPredicted RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ZFP36L1Q07352 338 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SLC14A1Q13336 389 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 LSAMPQ13449 338 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 KIF26BQ2KJY2 2108 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ANXA8L1Q5VT79 327 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 OR4C11Q6IEV9 310 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ANKRD26P1Q6NSI1 321 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 TMEM71Q6P5X7 295 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SATL1Q86VE3 508 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 CALHM3Q86XJ0 350 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 PLXDC1Q8IUK5 500 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ZCCHC7Q8N3Z6 543 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ACOT4Q8N9L9 421 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 OR4D9Q8NGE8 314 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 OR8J2Q8NGG1 315 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 RGMAQ96B86 450 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 TM4SF18Q96CE8 201 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 COQ8BQ96D53 544 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 FAM120BQ96EK7 910 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 CNDP2Q96KP4 475 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 PRRX2Q99811 253 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SH3GL3Q99963 347 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 LRRN3Q9H3W5 708 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 DCAF13Q9NV06 445 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 DDX18Q9NVP1 670 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ATP6V1HQ9UI12 483 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 RPS6KA6Q9UK32 745 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 SAMD4AQ9UPU9 718 aaKnown RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 ATG4BQ9Y4P1 393 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 TMEM184BQ9Y519 407 aaPredicted RBP6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 AK5Q9Y6K8 562 aa6.62□□□□□ -1.35
HMGCS2-204ENST00000544913 A0A1W2PR48 441 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 A0A1W2PS29 197 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 GABRR3A8MPY1 467 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PROB1E7EW31 1015 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 G3V2T6 193 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 CXCR6O00574 342 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 RFXANKO14593 260 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 TOX3O15405 576 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 GALR3O60755 368 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 LRATO95237 230 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PGM3O95394 542 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SERPIND1P05546 499 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 GP1BAP07359 652 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 DDX5P17844 614 aaKnown RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SOX18P35713 384 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SEPHS1P49903 392 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 ARSFP54793 590 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 MTPNP58546 118 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 TAS2R50P59544 299 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PHEXP78562 749 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 HSD11B2P80365 405 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 IL18R1Q13478 541 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 RUNX2Q13950 521 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 DAG1Q14118 895 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 GPR19Q15760 415 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms