RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 RCAN2Q14206 197 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 AGGF1Q8N302 714 aaeCLIP13.37□□□□□ -0.27
COPS7A-220ENST00000544725 NTNG2Q96CW9 530 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 PDLIM5Q96HC4 596 aaKnown RBP13.37□□□□□ -0.27
COPS7A-220ENST00000544725 SIGLEC10Q96LC7 697 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 DGAT2Q96PD7 388 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 EGFL8Q99944 293 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 GALNT8Q9NY28 637 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 IKBKGQ9Y6K9 419 aa13.37□□□□□ -0.27
COPS7A-220ENST00000544725 ANKRD33BA6NCL7 494 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 TRIM3O75382 744 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-220ENST00000544725 WDR47O94967 919 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 LRATO95237 230 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 IGKV3-11P04433 115 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 HPNP05981 417 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 PGAM1P18669 254 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 STT3AP46977 705 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 KCNC1P48547 511 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
COPS7A-220ENST00000544725 CDKL1Q00532 357 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 CRYMQ14894 314 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 NHSL2Q5HYW2 709 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 SLC29A4Q7RTT9 530 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 LUZP2Q86TE4 346 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 DIO2Q92813 273 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 ANKRD9Q96BM1 317 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-220ENST00000544725 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 KCNC2Q96PR1 638 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 SECISBP2Q96T21 854 aaKnown RBP13.36□□□□□ -0.27
COPS7A-220ENST00000544725 CCL19Q99731 98 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 SFXN3Q9BWM7 321 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 CAPS2Q9BXY5 557 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 CORO1CQ9ULV4 474 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-220ENST00000544725 VWA7Q9Y334 891 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 SLC6A5Q9Y345 797 aa13.36□□□□□ -0.27
COPS7A-220ENST00000544725 NCKAP5O14513 1909 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 TP53I11O14683 189 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 CRLF1O75462 422 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 SNX4O95219 450 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 ACSL3O95573 720 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 TBX6O95947 436 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-220ENST00000544725 PGGT1BP53609 377 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 CBLBQ13191 982 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 BIKQ13323 160 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 ACKR1Q16570 336 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 NTRK2Q16620 822 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 FAM45BPQ6NSW5 357 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 GALNT7Q86SF2 657 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 CNTN4Q8IWV2 1026 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 SRFBP1Q8NEF9 429 aaKnown RBP13.35□□□□□ -0.27
COPS7A-220ENST00000544725 FAM45AQ8TCE6 357 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 ABTB1Q969K4 478 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-220ENST00000544725 PERPQ96FX8 193 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
COPS7A-220ENST00000544725 WDYHV1Q96HA8 205 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 FBXL20Q96IG2 436 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 GAL3ST4Q96RP7 486 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 MAPKAP1Q9BPZ7 522 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 UGT2B28Q9BY64 529 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 UBQLN3Q9H347 655 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 GUCA1BQ9UMX6 200 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
COPS7A-220ENST00000544725 KIAA1549Q9HCM3 1950 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 IQANK1A0A1B0GTG1 560 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 RNF212BA8MTL3 300 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 CAPN14A8MX76 684 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 TTC4O95801 387 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 CYP4B1P13584 511 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 GDF5P43026 501 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 MASP1P48740 699 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 ZNF75DP51815 510 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 DIO3P55073 304 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 IGLV3-21P80748 117 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-220ENST00000544725 PLIN5Q00G26 463 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 FRA10AC1Q70Z53 315 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 VN1R5Q7Z5H4 357 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 PACS2Q86VP3 889 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 TAGAPQ8N103 731 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 ZPLD1Q8TCW7 415 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 ANKRD7Q92527 254 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 F2RL3Q96RI0 385 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 TBCDQ9BTW9 1192 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 PIGMQ9H3S5 423 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 UBTD1Q9HAC8 227 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 GPRC5BQ9NZH0 403 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 C15orf41Q9Y2V0 281 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 OARD1Q9Y530 152 aa13.34□□□□□ -0.27
COPS7A-220ENST00000544725 NINQ8N4C6 2090 aa13.33□□□□□ -0.27
COPS7A-220ENST00000544725 SONP18583 2426 aaKnown RBP13.33□□□□□ -0.27
COPS7A-220ENST00000544725 NPEPPSL1A6NEC2 478 aa13.33□□□□□ -0.28
COPS7A-220ENST00000544725 HRKO00198 91 aa13.33□□□□□ -0.28
COPS7A-220ENST00000544725 CDC7O00311 574 aa13.33□□□□□ -0.28
COPS7A-220ENST00000544725 FGF17O60258 216 aa13.33□□□□□ -0.28
COPS7A-220ENST00000544725 CNOT4O95628 575 aaKnown RBP13.33□□□□□ -0.28
COPS7A-220ENST00000544725 CPN2P22792 545 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms