RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TMEM132CQ8N3T6 1108 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 SIRT6Q8N6T7 355 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 OR4K14Q8NGD5 310 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 C9orf43Q8TAL5 461 aaPredicted RBP14.09□□□□□ -0.15
CD9-210ENST00000543916 ELP5Q8TE02 316 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 DOK4Q8TEW6 326 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 CKAP2Q8WWK9 683 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 KLHL29Q96CT2 875 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 DGAT2Q96PD7 388 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 SMAD5Q99717 465 aaKnown RBP14.09□□□□□ -0.15
CD9-210ENST00000543916 C1orf50Q9BV19 199 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 MEAF6Q9HAF1 191 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 MMP25Q9NPA2 562 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 SLCO1B3Q9NPD5 702 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 MED4Q9NPJ6 270 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 PFDN4Q9NQP4 134 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 TMED5Q9Y3A6 229 aa14.09□□□□□ -0.15
CD9-210ENST00000543916 C17orf105B2RV13 164 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 DYNC1I1O14576 645 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 ERAL1O75616 437 aaKnown RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 DDAH2O95865 285 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 GPR143P51810 404 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 XKP51811 444 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 PGDP52209 483 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 BIKQ13323 160 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 HEPACAMQ14CZ8 416 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 PRSS53Q2L4Q9 553 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 VWA5B1Q5TIE3 1220 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 IRAK1BP1Q5VVH5 260 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 TCTN3Q6NUS6 607 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 JMJD6Q6NYC1 403 aaPredicted RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 WDR75Q8IWA0 830 aaKnown RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 ST13P4Q8IZP2 240 aaPredicted RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 ZNF321PQ8N8H1 164 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 FNDC5Q8NAU1 212 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 APCDD1LQ8NCL9 501 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 B3GNT7Q8NFL0 401 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 OR14A16Q8NHC5 309 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 CLHC1Q8NHS4 586 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 NCLNQ969V3 563 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 CNRIP1Q96F85 164 aaPredicted RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 C7orf26Q96N11 449 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 TSSK3Q96PN8 268 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 AKTIPQ9H8T0 292 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 ZBTB20Q9HC78 741 aaPredicted RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 ZNF71Q9NQZ8 489 aaPredicted RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 PTGFRNQ9P2B2 879 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 BAIAP2L1Q9UHR4 511 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 ZNF223Q9UK11 482 aaPredicted RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 UTS2RQ9UKP6 389 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 PPIEQ9UNP9 301 aaKnown RBP14.08□□□□□ -0.16
CD9-210ENST00000543916 CLCA3PQ9Y6N3 262 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 CHD6Q8TD26 2715 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 CACNA1GO43497 2377 aa14.08□□□□□ -0.16
CD9-210ENST00000543916 PIEZO2Q9H5I5 2752 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 BOD1L1Q8NFC6 3051 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 HRKO00198 91 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 SDHDO14521 159 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 HDAC3O15379 428 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 OR10H2O60403 315 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 SLC35E2P0CK97 266 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 CPMP14384 443 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 COX7A2P14406 83 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 PORP16435 677 aaPredicted RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 TNNI3P19429 210 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 DDCP20711 480 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 PTGER1P34995 402 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 SOX11P35716 441 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 FEN1P39748 380 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 AP2B1P63010 937 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 LACTB2Q53H82 288 aaPredicted RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 AGAP7PQ5VUJ5 663 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 B3GNTL1Q67FW5 361 aaPredicted RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 H3F3CQ6NXT2 135 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 IKBIPQ70UQ0 350 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 MAVSQ7Z434 540 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 TICAM1Q8IUC6 712 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 CRLF3Q8IUI8 442 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 LIX1Q8N485 282 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 LSM14AQ8ND56 463 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 MORN4Q8NDC4 146 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 C7orf57Q8NEG2 295 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 SLC2A12Q8TD20 617 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 DAZLQ92904 295 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 GFM2Q969S9 779 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 EXOSC8Q96B26 276 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 MAGEB18Q96M61 343 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 ZNF681Q96N22 645 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 AGAP4Q96P64 663 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 NPAS2Q99743 824 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 PELOQ9BRX2 385 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 OR8D2Q9GZM6 311 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 SLC25A18Q9H1K4 315 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 KCNK13Q9HB14 408 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 EHD3Q9NZN3 535 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 PSME2Q9UL46 239 aa14.07□□□□□ -0.16
CD9-210ENST00000543916 G3BP2Q9UN86 482 aaKnown RBP14.07□□□□□ -0.16
CD9-210ENST00000543916 ZFYVE26Q68DK2 2539 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 TRBV11-1A0A0K0K1C0 115 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms