RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SLC28A1O00337 649 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PRKAB2O43741 272 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 OR2J2O76002 312 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF35P13682 527 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 DRD1P21728 446 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 HLA-DMAP28067 261 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 S100A2P29034 98 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CAPGP40121 348 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 GRIA3P42263 894 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RBX1P62877 108 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SP3Q02447 781 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ILKQ13418 452 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TMED2Q15363 201 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 LBHQ53QV2 105 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 P4HA3Q7Z4N8 544 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 LHFPL3Q86UP9 236 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 BLIDQ8IZY5 108 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PRSS35Q8N3Z0 413 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CYB561A3Q8NBI2 242 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 BPIFB6Q8NFQ5 453 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 OR6F1Q8NGZ6 308 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 AUTS2Q8WXX7 1259 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TOP1MTQ969P6 601 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TMEM45BQ96B21 275 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SAMD8Q96LT4 415 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF382Q96SR6 550 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PCYT2Q99447 389 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RPF2Q9H7B2 306 aaKnown RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 MRTO4Q9UKD2 239 aaKnown RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 DNPEPQ9ULA0 475 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PCDHA8Q9Y5H6 950 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ALG6Q9Y672 507 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 UBR3Q6ZT12 1888 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 NPIPB8E9PQR5 432 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SLC22A2O15244 555 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 CTNSO60931 367 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SUPT7LO94864 414 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 MED26O95402 600 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SERPINA2P20848 420 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 GLDCP23378 1020 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 IL1R2P27930 398 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 MAGEA6P43360 314 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 ADPRHP54922 357 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 HLXQ14774 488 aaPredicted RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 GLRA4Q5JXX5 417 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 WBP2NLQ6ICG8 309 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 PGBD2Q6P3X8 592 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SYT9Q86SS6 491 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 KBTBD8Q8NFY9 601 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SETD7Q8WTS6 366 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SERAC1Q96JX3 654 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 RBM15Q96T37 977 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 PARK7Q99497 189 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 POFUT1Q9H488 388 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 LDAHQ9H6V9 325 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 CTPS2Q9NRF8 586 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 RNF146Q9NTX7 359 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 DNMT3BQ9UBC3 853 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 FBXL2Q9UKC9 423 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 UTS2RQ9UKP6 389 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 KCNK6Q9Y257 313 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 CDY1Q9Y6F8 540 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 COL4A1P02462 1669 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 TCRBV21S2A2A0A5A6 115 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 PRR23D1E9PI22 279 aaPredicted RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 PRR23D2P0DMB1 279 aaPredicted RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 SPP1P10451 314 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 G6PDP11413 515 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 AOC1P19801 751 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 RPS3P23396 243 aaKnown RBP eCLIP8.5□□□□□ -1.054e-6■■■■■ 40.4
VPS13D-212ENST00000543766 ERP29P30040 261 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 NDST2P52849 883 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 BAMBIQ13145 260 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 ZRANB3Q5FWF4 1079 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 COQ5Q5HYK3 327 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 MRM1Q6IN84 353 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 ADNP2Q6IQ32 1131 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 TAS1R1Q7RTX1 841 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 NAA50Q9GZZ1 169 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 NUFIP1Q9UHK0 495 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 RNF11Q9Y3C5 154 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 RNF215Q9Y6U7 377 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 A0A087WXM4 84 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 C17orf105B2RV13 164 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 CXCR6O00574 342 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 ENSAO43768 121 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 MYL2P10916 166 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 DYNLL1P63167 89 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 FGFBP1Q14512 234 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 ANKRD54Q6NXT1 300 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 PDZD3Q86UT5 571 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 TRIM48Q8IWZ4 208 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 EMC1Q8N766 993 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 C3orf49Q96BT1 292 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 HARBI1Q96MB7 349 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 UTP23Q9BRU9 249 aaKnown RBP8.5□□□□□ -1.05
VPS13D-212ENST00000543766 NDOR1Q9UHB4 597 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms