RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 FOXK2Q01167 660 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 SRSF11Q05519 484 aaKnown RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 BIKQ13323 160 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 IL10RAQ13651 578 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 AGKQ53H12 422 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 ATP1A1-AS1Q5TC04 95 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 C6orf163Q5TEZ5 329 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 GKAP1Q5VSY0 366 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 CCDC81Q6ZN84 652 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 MED25Q71SY5 747 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 CPEB2Q7Z5Q1 589 aaKnown RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 PIGWQ7Z7B1 504 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 LRRC25Q8N386 305 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 GLB1L3Q8NCI6 653 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 VPS37AQ8NEZ2 397 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 DOK4Q8TEW6 326 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 MTERF3Q96E29 417 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 LPAR4Q99677 370 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 PELOQ9BRX2 385 aaKnown RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 BRINP2Q9C0B6 783 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 SDR39U1Q9NRG7 319 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 ZIM2Q9NZV7 527 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 ATP6V1HQ9UI12 483 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 CES1P1Q9UKY3 287 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 EXO1Q9UQ84 846 aaKnown RBP9.52□□□□□ -0.89
CPSF7-221ENST00000543545 ARL2BPQ9Y2Y0 163 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 HS3ST3B1Q9Y662 390 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 CLCA3PQ9Y6N3 262 aa9.52□□□□□ -0.89
CPSF7-221ENST00000543545 MDC1Q14676 2089 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 IGKV3D-11A0A0A0MRZ8 115 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 NSG1A0A0A6YYJ2 146 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 A0A1W2PS29 197 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 TCRBV16S1A1N1A0A5B0 115 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 SYNDIG1LA6NDD5 238 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 C17orf105B2RV13 164 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 TGFBR3LH3BV60 316 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 NR5A2O00482 541 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ANKRD28O15084 1053 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 CFLARO15519 480 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 EFSO43281 561 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 SEC24DO94855 1032 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 WT1P19544 449 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 GPX3P22352 226 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 GPC1P35052 558 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 KIR3DL1P43629 444 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 STT3AP46977 705 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ATP4BP51164 291 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 POLR2JP52435 117 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 EFNA3P52797 238 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 DGKQP52824 942 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 MANFP55145 182 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 KCNK10P57789 538 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 IRX1P78414 480 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ATP1A4Q13733 1029 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 PDE7AQ13946 482 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 UBAP2LQ14157 1087 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 UGT8Q16880 541 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 PRSS53Q2L4Q9 553 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 FAM174BQ3ZCQ3 159 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ZNF385BQ569K4 471 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 SPANXN4Q5MJ08 99 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 OR4F3Q6IEY1 312 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 PAPD4Q6PIY7 484 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 TMEM205Q6UW68 189 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 KIRREL2Q6UWL6 708 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 NDUFAF7Q7L592 441 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 PPP1R32Q7Z5V6 425 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 MRGPREQ86SM8 312 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 MTDHQ86UE4 582 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 PROSER1Q86XN7 944 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 RIMKLAQ8IXN7 391 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ST13P4Q8IZP2 240 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 NATD1Q8N6N6 113 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 CCDC197Q8NCU1 140 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 OR9I1Q8NGQ6 314 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ZFP28Q8NHY6 868 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 BCAS4Q8TDM0 211 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 DAZLQ92904 295 aaKnown RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 RIT1Q92963 219 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 CIDECQ96AQ7 238 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 NACC2Q96BF6 587 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 COQ8BQ96D53 544 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 CNRIP1Q96F85 164 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ZBED6CLQ96FA7 236 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-221ENST00000543545 TEX37Q96LM6 180 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 IP6K3Q96PC2 410 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 MESP1Q9BRJ9 268 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 DUSP26Q9BV47 211 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 CLMPQ9H6B4 373 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 ADAP2Q9NPF8 381 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 SAR1AQ9NR31 198 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 MRGBPQ9NV56 204 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 P4HTMQ9NXG6 502 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 TAS2R7Q9NYW3 318 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 CCDC167Q9P0B6 97 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 FBXL4Q9UKA2 621 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 PCDHGB4Q9UN71 923 aa9.51□□□□□ -0.89
CPSF7-221ENST00000543545 SCN3AQ9NY46 2000 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms